Artemia franciscana: 136042150
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Entry
136042150 CDS
T10524
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
afra Artemia franciscana
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afra03021
]
136042150
03036 Chromosome and associated proteins [BR:
afra03036
]
136042150
Transcription machinery [BR:
afra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
136042150
Chromosome and associated proteins [BR:
afra03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
136042150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
Tex_central_region
Tex_YqgF
SH2
HHH_9
HHH_3
S1_RRP5
Tex_N
Spt6_S1
HTH_10
KH_DEAH11
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
136042150
NCBI-ProteinID:
XP_065583136
LinkDB
All DBs
Position
Unknown
AA seq
1719 aa
AA seq
DB search
MADFVISEAEESENEEELDELERRRLKKLKAVKESDDEEEEDDDERLREELKDLIDDAPI
EDESGDESGSEGSYKGRKRRREEDELDDNLEEEDYELLEENLGVKLKRKKQFRRVQRLED
DESEEEEGDGRERVANELFEGSDQEGEDVESPERLPRAEEDLEAEEESDADDFIVDDEGK
PIGGRRKKPIFTDHALQTAQDTFGVDFDFDEFMVDEEAEEEESDVEYEEDGGRKKTKKIG
RKKTARKSIFEVFEPSELERGHFTDFDVQVRETDVPERMQLRMIPVTSASESELDKEAEW
IYRQAFLKSPVSSQDWYVEYRRRLGAERDVIPKIKKTLDHMRNQNLEVPFIAFYRKEIIH
PAFDINDLWRIYKFDEKWCQLQNRKNNMIKLFKKMRKYQEEKIMAAMDKPLDESMRILKD
EDIQRLEDASSLEEIRDNYIHFMLYYGDDVPVMQEADRQKQREEYKRRMELREIRRQERM
ENGEEGDEPMEEEADEPPPPDEDETIRQARKSDLYSVCRRAGLDGLAKRFGLTPEQFAEN
LRDGYQRHEVDQYPGDPIECASEFGNSRFADPKDALRAAKYMVAMQLAREPLVRHCVREV
FYERARINVVPTKDGIKEIDENHPLYALKYIKDKPIRTITGDQFLKLVSGEKDKLIKVEF
QHNIKGTTNPSYLEEIKQLYIRDEFSRQVQEWNKIRGEAIEECIQKILYPAFTLELQTLL
VKEAHEFISRACSHKLSNILKIAPYHIEFPDEEEDEWDTKEGIRVLSIAYVPDFNSASFG
IMLSPDGEAQETIRFEHLLKRRDAYREADRRGKLNDLSRLKDFIFNKKPHVICVGSESRE
AERVIEDIRNVVKELVDEEQFPTINVELVDDSMAKVYAVSKQAEMEFREFPELLRVAVSL
GRRLQDPLLEFSQLCNPDNEILCLKYHPLQDQLSDEELLEVLYYEFINRSNEVGVDINRA
INFPHTSYIVQFVCGLGPRKATALMKTLKQTNQRLENRTQLVTHCHMGPKVFVNCAGFIK
IDTNAVSDSTETYIEVLDGTRVHPETYEWARKMAVDALEYDEEDANPGDAIVDILQNPEK
LKELDLDAFANELERQSFGNKSITLYDIREELNHRYKDLRQPYRPPDAKEKFQLLIKESP
DSLYRGKLVQVIVTNFARRKPQREQLDHANPVRNEETGLWQCPFCSKNDYPDLSEVWNHF
DAGDCQGTAQGVQVRMDNGISGFIPVKSLSDSEVTNPEERVKPGQLIYARIMKVDEEKFK
IICTSKTSDLVDKDHFWKPQRDPYYDTEAENKDLKKEEDLRKAKSRQTYTKRVIVHPNFQ
NISYKEAEEKMALFDQGDVIVRPSSKGSDHLTVTWKVTDGIYQHIDVKEEGKENDFSIGQ
VLRIGDDEFEDLDEIIARHVNPLAANARDIIGYKYYKDFNLTLPENLHIKERDKTDEYLR
EEKKKNPGKINYLLCPSKEFPGKFLLSYMPRDKLVHEYITVTPEGFRLRGQVFDTFNQTL
KWFKEHFKDRMPRMQTRTPQVGDQTPGARSVSGYAGAQTPGAYSAFGANTPYTPSGQTPF
MTPYTSQTPRYTAPVAAGYSYGGMTPRTPSYPSSSRQIPSSYPPTVPMQIPPTVPVQPRI
PMGGGGVEDWGKAAIEWAKSRGATTPRGAQTPRGAVTPRYDDARNGSRTPGRQTPGRQTP
GRQTPGRQTPGRQTPGRQTPRQGGTPMDLGDSTPLYDER
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttgtgatatctgaggctgaagagagtgagaatgaggaggagcttgatgag
cttgaaagaaggagattaaagaaactgaaagctgtcaaagaaagtgatgatgaagaggaa
gaagacgatgatgaacgtcttcgagaagagcttaaagacttaatcgacgatgcaccaata
gaagacgagagtggggatgagagtggcagtgaaggtagttataaaggaaggaaaagaaga
agggaagaagatgagcttgatgataaccttgaggaagaagattatgagctacttgaggaa
aatctcggagtcaagctcaaaaggaagaaacagtttagaagagttcagcgtcttgaagat
gacgaatcagaggaagaagaaggtgatggaagggaaagagttgctaatgaactgtttgaa
ggctcagatcaggaaggagaagatgtggagtcccctgaacgacttccacgggcagaagag
gatctcgaggcagaagaggagtcagacgctgatgactttattgttgacgatgaaggaaag
cctattggtggtagacggaaaaagcctatatttaccgaccatgctttgcaaactgcccaa
gatacttttggtgtcgattttgactttgacgaatttatggttgacgaagaggcagaggaa
gaggagtcagatgttgaatatgaagaagatggtggaaggaaaaagacaaagaaaattgga
aggaagaaaacagctcgtaagtctatattcgaagtatttgagccctctgaactcgagaga
ggtcatttcaccgattttgatgtccaagttcgagagacagacgtgcctgaaaggatgcaa
ttaagaatgattcctgtgacgtcagctagtgagagtgaactggataaagaggctgaatgg
atttatcggcaggcctttttgaaatctcctgtgtcgtcccaggactggtacgttgaatat
cgacggcggcttggggctgaacgtgacgtaattccaaagatcaagaagactttggatcac
atgagaaatcaaaatcttgaagtaccttttattgctttctaccgcaaagagatcattcat
ccggcttttgatattaacgacctctggaggatttacaagtttgacgaaaaatggtgccag
cttcaaaatcgtaaaaataacatgattaaactttttaagaaaatgcgaaaataccaggag
gagaaaattatggctgctatggataagcctttggacgagagtatgcgaatattaaaggat
gaagatatacaaagacttgaggatgcatcatccctagaggagatcagggataactacatt
cattttatgctttattacggagacgatgtgccagtcatgcaagaagctgatcgccagaag
caacgtgaagaatataaaaggcggatggagttgcgtgaaattcgtcgtcaagagcgcatg
gaaaatggagaagaaggagacgaaccgatggaagaggaggcggatgagccccctcctcct
gatgaagatgagactattcgacaagcgcgaaagagtgacctctattcagtctgcaggcgt
gctggtcttgacggcttggccaaaagatttggtctgacgcctgaacaatttgccgaaaat
ctgcgtgatggttatcaacgacacgaagtggatcagtatcctggggatcccattgaatgc
gcctcggagtttggtaatagtagatttgcagatcctaaggatgctttgagagcagctaaa
tatatggtagccatgcagttggcaagggaacctctggttcgccactgcgttcgtgaagtt
ttctatgaacgtgcaagaattaacgttgtgcctaccaaagatggaatcaaagagattgat
gaaaaccaccccctgtatgcattgaagtatataaaagacaaaccaattcgcacaattaca
ggtgatcaatttttaaaactggtatcaggagaaaaggataaactcattaaagtggaattc
cagcataatatcaaggggacaacaaatccaagttacttagaagaaataaagcagttgtat
attagagatgagtttagtcgacaggttcaagaatggaacaaaatcagaggcgaagcaatt
gaagaatgtatacaaaagatactgtaccctgcatttacacttgagctccaaaccttattg
gtaaaggaggctcacgagttcatttctcgggcttgttctcataagctttccaacatcttg
aagatagctccatatcacattgaatttccagatgaagaggaagatgagtgggacacaaaa
gagggtatccgagttctgtctattgcttatgtaccagattttaattctgcttcttttggt
ataatgctttcacctgatggtgaggctcaggagacgattcgatttgagcacttgttaaag
agacgagatgcttatcgagaagcagacaggcgtggaaagttaaatgacttatctagattg
aaagattttattttcaataagaaacctcacgttatctgcgttggttcagagagtagggag
gctgaacgtgtgatagaagacataagaaacgttgtcaaagagcttgtggatgaggaacag
tttccaactataaatgttgaactagttgatgatagtatggctaaggtttatgctgtgagc
aagcaagcagagatggagtttcgcgaatttccagaactattaagagtagctgttagcctt
ggtaggcgcttgcaggatcctcttttggaattttctcagctttgtaatcctgacaatgaa
atcctttgtttgaagtatcatccattgcaagatcaactttctgatgaggaacttcttgaa
gtcttgtactatgagttcatcaatagaagtaatgaggtcggtgttgatataaatcgagct
ataaacttcccacatacatcctacattgttcagtttgtttgtggtttgggaccaagaaaa
gctacagcgttgatgaaaacattgaagcagacaaatcaaagactggaaaacagaacacag
ctcgtcactcactgtcatatgggaccaaaggtatttgtgaattgtgcgggattcattaaa
atcgatacaaatgcagttagtgatagtacagaaacatacatagaagtgttggatggcact
agagttcatcccgagacgtatgaatgggcaaggaagatggcagtggatgcccttgaatac
gacgaagaagatgctaaccctggggatgctattgttgacattttacagaatccagaaaag
ctcaaagaattggacttggatgcttttgccaatgaactggagaggcaaagttttggtaac
aaatcgataactctttatgatatcagggaggagttgaatcacaggtataaggacctgaga
cagccgtatagacctcctgatgccaaagagaaatttcagctcctgattaaagaatctcca
gatagtctatatagaggaaaattagtccaggtgattgtgacaaattttgctcggaggaaa
ccccagcgtgagcagttggaccatgccaacccagtacgtaacgaagaaaccggcttatgg
caatgtccgttctgttccaagaatgattatccggatctatccgaggtttggaatcatttt
gatgctggtgattgtcaaggcacagctcaaggtgttcaagttcgtatggataatggtata
tcaggttttattccagtgaagtcattatctgacagtgaagtaacaaatccagaagaaaga
gtgaagcctggtcaactgatttatgcacgaatcatgaaagtagacgaggaaaaattcaaa
attatttgcacctctaaaacatcagatttggtggataaggatcacttttggaaacctcaa
agagatccttactacgatactgaagcagaaaacaaggatctgaaaaaagaagaagatttg
agaaaagccaagtccagacaaacttatacaaagagagttattgttcacccaaactttcaa
aatataagctataaagaggccgaagaaaaaatggccttatttgaccagggtgatgtcatt
gtaaggccatcaagcaaaggatctgaccacttgactgtcacgtggaaagtcactgatggc
atttatcaacatattgatgtaaaagaggagggaaaagagaacgatttctcgattggtcaa
gtgcttcgcattggtgatgatgaatttgaagatttggacgaaattattgctcgacatgtg
aacccactcgccgccaatgctcgagatattataggctataaatattacaaggactttaac
cttactctaccggagaatcttcacattaaggagcgagataagacggacgaatatcttaga
gaagagaaaaagaaaaatccaggaaaaatcaactatcttctatgtccctcgaaggaattc
cctggtaaatttcttttgtcatacatgccacgagacaagctagttcatgaatatataaca
gtaacacccgaaggtttccggctccgaggtcaagtttttgacactttcaaccaaacgttg
aaatggttcaaagaacatttcaaggacagaatgccaagaatgcaaacccggactccccaa
gttggggatcagacaccaggagcaagatcagtcagtggctatgctggagcacaaacacct
ggtgcctactctgcttttggagcaaataccccgtatactccgtctggacaaacaccattc
atgacaccatatacttctcagactccacgctacactgcccctgtcgcagctggttacagt
tatggagggatgactccgaggacaccgtcgtatccatcttcaagtcgacagatcccgtca
tcttatccacctacagtcccaatgcaaattccaccaactgtgcctgtgcaaccacgtatt
ccgatgggtggaggtggagtggaagactgggggaaagctgctatagaatgggctaagagc
agaggtgcaactactccaaggggagctcaaactccaagaggcgctgttacgccaagatat
gatgatgcccgtaatggctcaagaactccaggaaggcaaactcctggaagacaaactcct
gggagacaaactcctgggagacagactcctggaaggcaaactcctggtagacagactcct
cgtcagggtggtactccaatggacttgggagactccactccactgtatgatgaaagatag
DBGET
integrated database retrieval system
