Allofrancisella frigidaquae: E3E15_00915
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Entry
E3E15_00915 CDS
T06608
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
afri
Allofrancisella frigidaquae
Pathway
afri03030
DNA replication
afri03430
Mismatch repair
afri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E3E15_00915 (holA)
03430 Mismatch repair
E3E15_00915 (holA)
03440 Homologous recombination
E3E15_00915 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afri03032
]
E3E15_00915 (holA)
03400 DNA repair and recombination proteins [BR:
afri03400
]
E3E15_00915 (holA)
Enzymes [BR:
afri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E3E15_00915 (holA)
DNA replication proteins [BR:
afri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E3E15_00915 (holA)
DNA repair and recombination proteins [BR:
afri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E3E15_00915 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delt_C
RavZ_C
PAN_3
Motif
Other DBs
NCBI-ProteinID:
QIV93995
UniProt:
A0A6M3HS73
LinkDB
All DBs
Position
210369..211349
Genome browser
AA seq
326 aa
AA seq
DB search
MELSYFDFIKMTDLAKYKLFIITGDEPLQRYNVIEKITNEFKNRNFEIVRHDLSEQNYDT
LYQEADSLSLFSVDKFIQFSFEKVPQKPLQQALIESILKPSDNVYLLAFNGLKKQNLSSK
WFQSLVQNALHIHIHQPDITNAITIINHELQQSSLTLTTEAAQLLAQKTEGNLIAAKQII
KLLSRQNTQNFDDKTLRPFLHEHTSFDVFDLSDTILSQQKSKALTILNSILTESDKPPLI
LWTLKRELRVISQLKSTQNVYHQKIFKDNNIWSSKQKYYTSLANRVSSETVLSCLQKCLD
TDLCIKGAKKGNINLKLNEIVFSLVS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggaattaagctattttgactttataaaaatgacagacttggcaaaatacaaacttttt
ataattacaggagatgagcctttacagcgttataatgttattgaaaaaattacaaatgag
ttcaaaaacaggaattttgaaatagttaggcatgatttaagtgagcaaaactatgatact
ctctatcaagaagctgatagccttagtctatttagcgtagataagtttatacagttcagt
tttgaaaaagttcctcaaaaacctttgcagcaagctcttattgaaagtattttaaagcct
agtgataatgtctatttattggcttttaatgggcttaagaaacaaaatttatcaagtaaa
tggtttcaaagtttagtccaaaatgctcttcatatacacatacatcagccggatataact
aatgctataactataataaatcatgagttacagcagtcaagtttgactttaacgaccgaa
gcagctcagttactagctcaaaaaactgaaggaaatctaatagctgctaagcaaataata
aagctcctttcacgccaaaacactcaaaattttgatgataaaaccttaagacctttttta
catgagcatactagttttgatgtctttgatttatcagacactattttaagtcaacaaaag
tcaaaagctttaacaatattaaatagtattcttactgagagtgataaacctcctcttata
ctttggactttaaaaagagagctgcgagtcatctctcagttaaaatcaacacagaatgtt
tatcatcaaaagatttttaaggataataatatttggtcgtctaagcaaaaatattataca
agtttagccaatagagttagttctgagactgtattatcctgtttacaaaaatgcttagat
acagatttatgtataaaaggagcaaaaaaaggaaatatcaatcttaaacttaatgaaata
gtttttagtctagttagctaa
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