Allofrancisella frigidaquae: E3E15_00980
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Entry
E3E15_00980 CDS
T06608
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
afri
Allofrancisella frigidaquae
Pathway
afri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E3E15_00980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afri03400
]
E3E15_00980
Enzymes [BR:
afri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3E15_00980
DNA repair and recombination proteins [BR:
afri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E3E15_00980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
tRNA_anti-codon
RecG_wedge
AAA_30
RecG_dom3_C
Cas3-like_C_2
SNF2-rel_dom
SecA_DEAD
TsaE
ERCC3_RAD25_C
SLFN-g3_helicase
IstB_IS21
RMI2
Motif
Other DBs
NCBI-ProteinID:
QIV94006
UniProt:
A0A6M3HW76
LinkDB
All DBs
Position
219700..221736
Genome browser
AA seq
678 aa
AA seq
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MKFLDFLGVGDATIKALAKNSLYQPEDLLFVFPKVYKDTRFITSIKNLVVDKKSVIEGRI
TNVTYKKTGKKFLRFLINDGTGVCSVILFKFYPNQIAMLENAQYVRCYGKIDVSQDFQMI
HPEWSVIKEGKCLLEQKLSAVYGLKKVPDRVIANIITKILQDSQIKDLIPQTYLKSYSLM
KLTDALYYLHALTDTIDERYLSKARYSIKFEEMLAYKLAEENIKKDLSKTLSPKLTLKDG
DVEKFYNKLPYSLTNAQEKAIKQILVDIRKANTMIRLLQGDVGAGKTIVATVALYAAAVS
GYQAAIMAPTEILAEQHYKFLSDYLTDFGIEVIPLLGKLTAKQTKTSLDRIKNLSNCIVV
GTHAIFQERVEYNNLGLVVVDEQHRFGVEQRLALIKKGINGKKIAPHQLIISATPIPRTL
AMTLYGNLELSILDELPPNRKPIVTTVLNRSRKLDLIAKLKQAISRKEQVYWVCPLVEES
ESMDFLQDVKTLYAELTGELGDDKVGLVYGSMKSKEKIQVMNDFKAAKYDVLVATTVIEV
GVDVPNASIMIIDNAERLGISQLHQLRGRVGRGSKESYCILLYSDKISEIGKKRLSLIRQ
SQDGFYLAEKDLEIRGAGDILGKEQSGISTFITFDINEYYDNYQLVSRLAKQIRQDYPEA
IPQLVARWFKRRITYVDV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctagattttttaggggttggtgatgctactataaaggctttggctaaaaac
agcttgtaccagccagaggatttattatttgtttttccaaaagtttataaagatactagg
tttataacttctatcaaaaatctcgtagtagataaaaaaagtgttattgaaggtagaatc
acaaatgttacttataaaaaaacaggaaagaaatttttacgctttttgattaatgatggt
acaggtgtttgctctgtgattttgtttaaattttacccaaaccaaattgctatgctagaa
aacgcacagtatgtaaggtgttatggtaaaatagatgtatcacaagatttccaaatgatt
catccagaatggtcagtaataaaagaaggtaaatgtttacttgagcagaaactatctgca
gtttatggactaaaaaaagtaccagatagagtaatagctaatataatcaccaaaattttg
caagatagtcaaataaaagatttaattccacaaacctatctaaaatcatatagtttgatg
aagcttactgatgctttatattatctccatgctctaacagatactatagatgaacgctat
ttatcaaaagcaaggtattctattaaatttgaagagatgttagcttataagttagccgaa
gaaaatataaaaaaagatctttcaaaaactttatctcctaagcttactttaaaggatggt
gatgtagagaagttctataataaattgccatatagtttaactaatgctcaagagaaagcg
atcaagcaaattttagttgatattagaaaagcaaatacaatgataaggctattacaagga
gatgttggagctggtaaaactatagttgcaactgtagctttgtatgctgctgcagtatca
ggttatcaagctgcgattatggcaccaacagaaattttggcagagcaacactataagttt
ttatcagattatttgactgattttgggatagaggttataccgctgctaggtaaattaacg
gcaaagcaaactaaaactagtttagataggataaaaaacttatcaaattgtattgtagtt
ggaactcatgctatattccaagagcgtgttgaatataataaccttgggctagtagttgta
gatgaacaacatagatttggtgttgagcaaaggttagcattgattaaaaaaggcattaac
ggaaaaaaaatagctcctcatcagcttataatatcagcaacccctattcctagaacttta
gcaatgactttatatggaaatcttgaactttctatattagatgagttgccaccaaataga
aaacctatagttactaccgttcttaatcgttcacgaaaattagacttaatagcaaaatta
aagcaagcaatatctagaaaagagcaagtttattgggtttgtccgcttgttgaggaatct
gaaagtatggattttttacaagatgtaaagacattgtatgcagagcttacaggtgagctt
ggagatgataaagttgggttagtatatggtagtatgaagtccaaagaaaaaatccaagtt
atgaacgattttaaagcagctaaatacgatgttttggttgcaacaacggttatagaagtt
ggtgttgatgttcctaatgcaagtattatgataattgacaatgctgaaaggcttggaatt
tcacaattacatcagttaagaggtagagtcggtagaggctcaaaagaaagttattgtata
cttttgtatagtgataaaattagtgaaattggtaaaaaaagactatctttaatccgtcaa
tctcaagatggcttttatttagcagaaaaagatttagaaatacgtggagcaggtgacatt
ttaggtaaggaacagtctggtatatcaacgtttataacttttgatataaacgagtactat
gacaattaccagttggtatctaggttagctaagcaaataaggcaggattatcctgaagca
atacctcagctagtagctagatggtttaaacgaagaataacgtatgtggatgtttaa
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