KEGG   Allofrancisella frigidaquae: E3E15_01530
Entry
E3E15_01530       CDS       T06608                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
afri  Allofrancisella frigidaquae
Brite
KEGG Orthology (KO) [BR:afri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:afri03016]
    E3E15_01530 (truB)
Enzymes [BR:afri01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     E3E15_01530 (truB)
Transfer RNA biogenesis [BR:afri03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    E3E15_01530 (truB)
 Prokaryotic type
    E3E15_01530 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: QIV94103
UniProt: A0A6M3HSG5
LinkDB
Position
332886..333791
AA seq 301 aa
MKKNKLNLNGIIVINKAKGISSNKILQQLKYLYNAKKAGHTGTLDPMATGVLPICFGRAT
KIAQYLLDADKEYIATIKLGIQTTTGDAEGEIVTILDVPKLSNTLIENILDKFRGQSDQT
PPIYSALKYNGQPLYKLAREGKQVEIRPRKITIYQLKLLSSKDDTLEIKVRCSKGTYIRS
LAMDIGTELGCGGHLIALQRTQSGPFSLDKAYEIEGLKDLSFEEKLDTIEHIESVFKDKP
IYTLDVNQKHDLYNKGILTTQADINGVFRIYDENKFIAVAEFDKGNLVSKKFFEQEKLIS
E
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaaaaaaataagctaaatttaaatggtataatagtaataaataaagctaaaggtatt
agctcaaataaaattctacagcaattaaaatatttatataacgctaaaaaggctggccac
actggcacattagaccctatggcaacaggtgttttgccaatatgttttggtagagcaacc
aagatagctcaatatttacttgatgctgacaaagagtatatagcaacaattaaacttggt
atacaaaccactaccggtgatgcagaaggtgagatagttacaattttggatgttcctaaa
ctatcaaatacacttatagaaaacatattagataaatttcgaggccaaagtgatcagacc
ccaccaatatattcagctttaaaatataatgggcaaccactctataagctggcgagagag
ggtaaacaagttgaaataagaccacgaaaaataaccatatatcaacttaagttgctaagt
agtaaagatgatacactagagattaaggttagatgttctaaaggaacatatatccgtagt
ttagctatggatataggtacggaacttggttgtggaggtcatttaatagcattacaacgg
actcaaagtggtccattttctctagataaagcatacgaaattgagggtttgaaagattta
agttttgaagaaaaacttgatactatagaacacatagaaagtgtatttaaagataaacca
atatacactttagatgtaaatcaaaagcatgatttatacaataaaggtatcctaacaact
caagcagatatcaatggagtttttagaatatatgatgagaataaatttattgcagtagct
gaatttgataaaggtaatttagttagcaaaaaattttttgagcaggaaaaattaataagt
gagtaa

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