Allofrancisella frigidaquae: E3E15_01885
Help
Entry
E3E15_01885 CDS
T06608
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
afri
Allofrancisella frigidaquae
Brite
KEGG Orthology (KO) [BR:
afri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afri03009
]
E3E15_01885 (rimO)
Enzymes [BR:
afri01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E3E15_01885 (rimO)
Ribosome biogenesis [BR:
afri03009
]
Prokaryotic type
ribosomal protein modification factors
E3E15_01885 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CDKN3
YajR_YAM
DUF7823
Motif
Other DBs
NCBI-ProteinID:
QIV94171
UniProt:
A0A6M3HVU4
LinkDB
All DBs
Position
407767..409086
Genome browser
AA seq
439 aa
AA seq
DB search
MIKIPKIGFVSLGCPKNLVDSERIITKLKAEGYDLVDSYEMADMVIVNTCGFLNSAIDES
LEVIGEAIAENGKVLVTGCLGNKAELIKEKHPEVLSITGPQDYENLIEAVHTHAPIFAND
FVSLVPPQGIKLTPRHYSYLKISEGCNNTCTFCIIPDIRGKLKSRSIDNIMKEAEKLKNA
GVKELLVISQDTSAYGVDIKYKSGIWRDKEYQSNILDLATALGDLDIWTRLHYVYPYPHV
DKIVPLMAQGKILPYLDVPLQHSSPEVLKRMKRPAHTQKTLDRINKWRDICPDITIRSTF
IVGFPGETEEDFEHLLDFAEKAQLDRVGCFKYSEVEGAKANGFDNLISEEVKQQRLDEFM
GLQAQISADKLQSFIGTEQQIIIDSINKDENYAIGRTKYDAPEVDGQVIVGDAIERGLKV
GEFATVEITESTEYDLIAD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaattcctaaaattggttttgtaagccttgggtgtcctaaaaatttagtagat
tcagaacgtataattactaaattaaaagctgaaggctatgatcttgttgatagttatgaa
atggctgatatggttatagttaatacatgtggctttttaaattcagctatagatgagtct
ctagaagtgattggtgaagcaattgctgagaatggtaaagtgttagtaactggttgtttg
ggtaataaggctgaacttatcaaagaaaaacatccagaagttttaagtatcacaggtcca
caagattatgaaaatttaatcgaagctgtgcatactcatgcgccaatttttgctaatgac
tttgtatctttggtgcctccacaagggataaaactgactccaagacactattcataccta
aaaatatcagaaggatgtaataatacttgtactttttgtattattccagatatacgtggt
aagctaaaaagtcgctctatcgataatataatgaaagaagctgagaagcttaaaaatgct
ggagttaaagaattacttgtgatatctcaagacacttctgcatatggtgttgatatcaaa
tataaatctggtatttggagagataaagagtatcaaagtaatattttagatcttgctaca
gctttaggtgatttagatatttggacaaggttacattatgtttatccgtatcctcatgtg
gataaaattgtaccacttatggctcaggggaaaatactgccttatttagatgtgccttta
cagcattcatcaccagaagttttaaagagaatgaagcgtcctgcacatacgcaaaagact
ttagatagaataaacaaatggcgtgatatttgcccagatataactattcgtagtactttt
attgttggttttccaggtgagacagaagaagattttgagcatttattagattttgcagaa
aaagcgcagcttgacagggtaggttgttttaaatattctgaagttgaaggagctaaggca
aatggttttgataatcttatttccgaagaagttaaacaacaacgtttagatgagtttatg
gggttacaagctcaaataagtgctgataagttacaaagttttataggtacagagcagcag
ataattatagattctattaataaagatgaaaattatgctattgggcgaactaaatatgat
gctccagaggttgatggtcaggtaatcgttggcgatgcaattgagagaggtttaaaagta
ggagaatttgctacggttgaaataacagaatctaccgaatatgatcttatagctgattag
DBGET
integrated database retrieval system
