Allofrancisella frigidaquae: E3E15_03285
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Entry
E3E15_03285 CDS
T06608
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
afri
Allofrancisella frigidaquae
Pathway
afri03420
Nucleotide excision repair
afri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E3E15_03285
03430 Mismatch repair
E3E15_03285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afri03400
]
E3E15_03285
Enzymes [BR:
afri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3E15_03285
DNA repair and recombination proteins [BR:
afri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E3E15_03285
MMR (mismatch excision repair)
Other MMR factors
E3E15_03285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
ResIII
AAA_30
HNOB
LolA_2
DEAD
AAA_11
CtIP_N
Motif
Other DBs
NCBI-ProteinID:
QIV94432
UniProt:
A0A6M3HW08
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All DBs
Position
707198..709270
Genome browser
AA seq
690 aa
AA seq
DB search
MQYTSEQQKIIQHDIVSHALVSAVAGSGKTQTLIARIEYLLAKGIPANKILVLMYNKSAQ
LDFANRLKKVLSAEKSKYINVRTMHSLGNSFLQAFAKAGYIEFNKILKDYEVDSILLNLI
KTHQKEFKIIKEIDSDRVEAFKEYISILKSDLCLDNKKLKSLNSKEKKLLDKIFVEFNKQ
CEKLKAITYDDMIYLPAKFFEKDKANISRANNLYSHIIIDEYQDINPIQQFFLKCLVGDN
TYIMAVGDVDQTIYQWRGSTPYYMLEGFKKDFKKVKQYQLSYTFRYGDLISLMANNIIAN
NKKRHDNLCITYPKLDRTTNISILDNSDKAVLKLKALIELGINASDIAILVRKYNSTTVF
ELSCLYNDLPYHVVADKDIFSENIFKAIYGYLMLLSKGYGLEKHTIDQRIEFIKAMLDYP
SLYLKKEQKQALAVKIAKNIDQATSLIIELSKNVDKPFKEKNILAVAHCWRTIFNNTRAK
RPGKAIDFIFETLEIEKLISKVSAETYSSRSKLQIIEGISSFAKSNKETLNVFIDLLYEL
YLKSTQQGLNVTNPNQVQIMSMHKAKGLEWDYVVIHDATEGGFFGENNSKISEEILEEER
RLFYVAITRVKKHLFVVTADDIDRLSEWYKIKNNTYPKDLKCKNSLRFLYESNLIECENY
LSSLNQLKKEDIKNSIFKKYHLGRVMLAEF
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatacatccgagcaacaaaaaatcatacagcatgacatagttagtcatgcatta
gtttcagcagtagcaggaagtggtaagactcaaacacttatagcaagaatagagtattta
ttagctaagggcattccagcaaataaaatacttgttcttatgtataataaatcagcacaa
ttagattttgcaaacagattaaaaaaagttttatcagctgagaaatcaaagtatataaat
gtacgtactatgcattctttaggtaatagctttttacaagcttttgctaaagcaggatat
attgaatttaataaaattctcaaagattatgaggttgacagtattttattaaatttaatt
aaaacccaccagaaggaatttaaaattattaaagagatagatagtgatagggtagaagct
tttaaagaatatatttctattttaaaatctgatctttgcttagataataaaaaactaaaa
agtttaaactctaaagaaaagaaacttttggataaaatatttgttgaatttaacaagcaa
tgtgaaaagttaaaagctattacatacgacgatatgatttaccttccagcaaaatttttt
gagaaagataaagcaaatatctcacgagctaataatttatattcacatatcattatagat
gaataccaagatataaacccaatacaacaattttttttaaagtgtctagtaggcgataat
acctacatcatggcagtaggggatgtggatcaaactatatatcaatggcgtggatcaact
ccatattatatgttagagggcttcaaaaaggactttaaaaaagtcaaacaatatcaactt
tcatatacgtttcgctatggtgatttaatatcacttatggctaataacattatagccaat
aataaaaaacgtcatgataacctatgtattacttatccaaagttagatagaactacaaat
attagtattctagataatagtgataaagctgtgttaaaactaaaagctctaattgaacta
ggaatcaacgcaagtgacatcgctatattagttagaaaatataattcaacaaccgttttt
gaattaagttgtttatataatgatttgccatatcatgtggttgctgataaggacattttt
agtgaaaatatatttaaagctatttatggctatctaatgcttttaagcaaaggctatggc
cttgaaaaacatactatagatcaacgtatagaatttataaaggctatgcttgactatcca
tctttataccttaaaaaagagcaaaaacaagctttagctgtaaaaattgctaaaaatatc
gatcaagctacaagtttaattatagagttaagtaaaaatgttgataaaccttttaaagaa
aaaaatatccttgctgtggcacactgttggcgaactattttcaataatacacgtgcaaaa
agaccaggtaaagccatagacttcatatttgaaacgttagaaatagaaaagcttatatct
aaagtctcggcagagacatattctagtaggtcaaaacttcagataattgaaggaatatct
agctttgctaaaagtaacaaagaaactcttaatgtatttatagaccttttatatgaacta
tatctaaaatctactcaacaaggacttaatgttactaatcctaatcaggttcaaataatg
tctatgcataaagcaaagggtttagagtgggattacgtagttatccatgatgctacagaa
ggaggtttttttggtgaaaataattcaaaaatatcagaagagattttagaagaagaacgc
aggcttttttatgtagctatcacaagagtaaaaaaacacctttttgtagtaacagcagat
gatattgataggctttctgaatggtataaaataaaaaataacacatatccaaaagactta
aagtgtaaaaatagccttcgatttttatatgaaagcaatttaattgaatgtgagaattat
ttaagtagtttaaatcaactaaaaaaagaggatataaagaatagtatttttaagaagtat
catctgggtagagtcatgttggccgaattctag
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