Allofrancisella frigidaquae: E3E15_05115
Help
Entry
E3E15_05115 CDS
T06608
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
afri
Allofrancisella frigidaquae
Pathway
afri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E3E15_05115 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afri03400
]
E3E15_05115 (mutM)
Enzymes [BR:
afri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
E3E15_05115 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E3E15_05115 (mutM)
DNA repair and recombination proteins [BR:
afri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E3E15_05115 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QIV94762
UniProt:
A0A6M3HWW1
LinkDB
All DBs
Position
1102423..1103247
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETVKKGLLDSVVDHTIKNIQINTEKLRYPLDKVALGKLKNKQIKDVQRRGKHL
IVFLEKNLQLIIHLGMSGVIKIKNSSTYTVIKHDHIILDLNNQLSLIYNDPRKFGYWLIN
ETLFPLEHQVLASHGVEPLTADFNCDYLLSKLAKTSRKIKQTIMDNSIVVGVGNIYASEA
LFDSRILPTRKSNTITKKEANRLVISIKKILEKAIKEGGTTLKDYKNTEGKPGYFTQQLN
VYGRVKQPCYTCKTEIQSLVIGQRNTFFCKKCQK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttacctgaggtagaaactgtaaaaaaaggtttattagatagcgtagttgac
catactattaaaaatatacagataaacactgaaaagttaaggtatcctcttgataaagta
gcgttaggtaaattaaaaaacaaacaaataaaagacgtacaaagaagaggcaagcattta
atagtttttttagaaaagaatctgcaattaataatccatttaggtatgtccggagtaatt
aagattaaaaactcttcaacttatactgtaattaagcatgatcatattattttagattta
aataatcaactaagtctaatatataatgacccacgtaagtttggctattggttaatcaat
gagactctatttccattagaacatcaagttttagcatctcatggtgtagagcctttaaca
gctgactttaactgtgattacctactttcaaagctagcaaaaacctcacgaaaaataaaa
caaactattatggacaatagtattgtagtaggtgtgggtaatatttacgcttcagaagct
ctttttgatagtcgtatacttccaaccagaaaatcaaatactatcacaaaaaaagaagct
aacagactagtaatttctattaaaaaaatccttgaaaaagctataaaagaaggtggaaca
acccttaaggattataagaacacagaaggtaaacccgggtactttacccaacaactgaat
gtttacggcagagttaaacagccttgttatacttgtaaaacagaaatacaaagcttagtc
ataggacaaagaaatacttttttttgtaagaaatgtcagaaatag
DBGET
integrated database retrieval system
