Actinoplanes friuliensis: AFR_04920
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Entry
AFR_04920 CDS
T02892
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
afs
Actinoplanes friuliensis
Pathway
afs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFR_04920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afs03019
]
AFR_04920
03110 Chaperones and folding catalysts [BR:
afs03110
]
AFR_04920
03029 Mitochondrial biogenesis [BR:
afs03029
]
AFR_04920
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afs04147
]
AFR_04920
Enzymes [BR:
afs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AFR_04920
Messenger RNA biogenesis [BR:
afs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AFR_04920
Chaperones and folding catalysts [BR:
afs03110
]
Heat shock proteins
HSP60 / Chaperonin
AFR_04920
Mitochondrial biogenesis [BR:
afs03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AFR_04920
Exosome [BR:
afs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AFR_04920
Exosomal proteins of other body fluids (saliva and urine)
AFR_04920
Exosomal proteins of breast cancer cells
AFR_04920
Exosomal proteins of colorectal cancer cells
AFR_04920
Exosomal proteins of bladder cancer cells
AFR_04920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AGZ39273
UniProt:
U5VQN5
LinkDB
All DBs
Position
1066213..1067859
Genome browser
AA seq
548 aa
AA seq
DB search
MAKILSFSDDARHLLEHGVNTLADTVKVTLGPRGRNVVLDKKFGAPTITNDGVTIAKEIE
LSDPYENLGAQLVKEVATKTNDVAGDGTTTATVLAQALVREGLRNVTAGANPIALKRGMD
LAAEAVSKALLEKAVEVADKKAIANVATISAQDATIGDLIAEAMERVGRDGVITVEEGSA
LHTELDVTEGLQFDKGFISPNFVTDAESQEAVLEDAYLLITTQKISSVEEMLPLLEKVLS
GGKPLLIVAEDVDGQALSTLVVNALRKTFKVAAVKAPGFGDRRKAMLQDLAIATGGELIA
PELGYKLDQVTLDMLGTARRVVVDKENTTIVDGGGRKAEIDDRVSQIRKEIEASDSDWDR
EKLSERLAKLSGGIAVIKVGAATEVEMKERKHRIEDAIAATKAAVEEGTVPGGGAALAQV
ASTLDGNLGLTGEEAVGVQIVRKALVEPLRWIAQNAGHDGYVVVGKSAELGWGHGLNAAT
DEYVDLVAAGIIDPVKVTRNAVSNAVSIAALLLTTESLVVEKPAEPEPAAAGGGHSHGGH
GHQHGPGF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattctcagtttctccgacgacgcccggcacctgttggagcacggcgtcaac
acgctcgccgacacggtcaaggtcaccctcgggccgcgcggccgcaacgtcgttctcgac
aagaagttcggtgcgcccacgatcaccaacgacggtgtcaccatcgccaaggagatcgag
ctctccgacccgtacgagaacctcggtgcccagctggtcaaggaggtggcgacgaagacc
aacgacgtcgccggcgacgggaccaccacggcgaccgtgctcgcgcaggcgctggtccgt
gagggcctccgcaacgtgaccgccggtgccaacccgatcgcgctcaagcgcggcatggac
ctggccgccgaggccgtctccaaggcgctgctcgagaaggcggtcgaggtcgccgacaag
aaggcgatcgcgaacgtcgccaccatctcggcgcaggacgccaccatcggcgacctgatc
gccgaggccatggagcgggtcggccgcgacggtgtcatcaccgtcgaggagggctccgcc
ctgcacaccgagctcgacgtcaccgagggtctgcagttcgacaagggcttcatctccccg
aacttcgtgaccgacgccgagtcgcaggaggccgtcctcgaggacgcgtacctcctgatc
accacccagaagatctccagcgtcgaggagatgctgccgctgctggagaaggttctctcc
ggtggcaagccgctcctcatcgttgccgaggacgtcgacggccaggcgctgtcgaccctc
gtggtcaacgccctgcgcaagaccttcaaggtcgccgccgtcaaggcgcccggcttcggg
gaccgccgcaaggcgatgctgcaggacctcgcgatcgcgaccggtggcgagctcatcgcc
cccgagctcggttacaagctcgaccaggtcaccctcgacatgctgggcaccgcccgccgc
gtcgtggtcgacaaggagaacacgaccatcgtcgacggtggcggtcgcaaggccgagatc
gacgaccgggtctcgcagatccgcaaggagatcgaggcgtcggactccgactgggaccgc
gagaagctctcggagcggctggccaagctgtccggcggcatcgcggtgatcaaggtcggt
gccgcgaccgaggtcgagatgaaggagcgcaagcaccgcatcgaggacgccatcgcggcg
accaaggctgcggtcgaggagggcactgtcccgggtggcggcgccgccctcgcgcaggtc
gcctcgacgctcgacggcaacctcggcctcaccggcgaggaagcggtcggcgtgcagatc
gtccgcaaggcactggtcgagccgctgcgctggatcgcccagaacgccggtcacgacggt
tacgtcgtggtgggcaagtccgccgagctcggctggggccacggcctcaacgcggccacc
gacgagtacgtcgacctggtcgcggccggcatcatcgacccggtgaaggtgacccgcaac
gcggtctccaacgccgtctcgatcgccgcgctgctgctcaccacggagagcctcgtggtc
gagaagccggccgagccggagcccgccgctgccggtggtggccacagccacggtggccac
ggtcaccagcacggcccgggtttctga
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integrated database retrieval system
