Actinoplanes friuliensis: AFR_05070
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Entry
AFR_05070 CDS
T02892
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
afs
Actinoplanes friuliensis
Pathway
afs03420
Nucleotide excision repair
afs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AFR_05070
03430 Mismatch repair
AFR_05070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afs03400
]
AFR_05070
Enzymes [BR:
afs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AFR_05070
DNA repair and recombination proteins [BR:
afs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFR_05070
MMR (mismatch excision repair)
Other MMR factors
AFR_05070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DUF4719
Motif
Other DBs
NCBI-ProteinID:
AGZ39303
UniProt:
U5VQR2
LinkDB
All DBs
Position
1103484..1105796
Genome browser
AA seq
770 aa
AA seq
DB search
MLVGLNGPQRDAVTHAGSPLLIVAGAGSGKTRVLTHRIAYLLAERDVHPGQIIAITFTNK
AAGEMKERVAALVGPRARLMWVSTFHSACVRILRAEHEHAGLKSTFSIYDADDSRRLMQL
VARELDLDPKRYTARGLAAQVSNLKNELVEPEEFKDKAKGPNERAVAEAYELYQRRLKEA
HALDFDDIIMTTVHLLQSHPHVAETYRRRFRHVMVDEYQDTNHAQYMLVKELVGKPGGDL
EPGELCVVGDADQSIYAFRGATIRNILEFERDYPDARTILLEQNYRSTQTILSAANAVID
RNTSRKPKRLWSDQGAGEQIVGYVADTEHAEADWVAREIDRLCDNHEVRPGDVAVFYRTN
AQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDALGYLRAVVNDDDTVSIRRVLNTPRRG
IGDRAEACVEALSTRDRISFGQALRGAKNAPGISTRAANSIGDFVQLLDDLREQSRTAPP
EEILEAVLQRSGMLSELEESLDPQDQGRVENLQELVSVAREYTERVEAQAAEDDDAPAAT
LAGFLEQVALVADADQIPSDDPDHQGVVTLMTLHTAKGLEFPVVFLTGLEDGVFPHTRAL
GDNTELEEERRLAYVGITRARQRLYLSRAVTRSAWGQPQYNPPSRFTDELPPELVRWERT
AGSYTSWSGTGGGVGGRGGGDRGRGGGFAGGTPKAQQLASRLGVDASRLTTASELKQPPK
VAPGDRVNHQRYGLGRVVVVDGHGPGARAQIDFGDQVMWLVLRHAPIEKI
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
ttgctggtcggcctcaacgggccgcagcgtgacgccgtcacccatgcggggtcgccgctg
ctgatcgtggcgggtgccgggtcgggcaagacgcgggtgctgacgcaccggatcgcctat
ctgctggccgagcgggatgtgcaccccgggcagatcatcgcgatcacgttcaccaacaag
gccgccggtgagatgaaggagcgggtcgccgcactggtcgggccgcgggcccggctgatg
tgggtgtcgacgttccactcggcgtgtgtgcggatcctgcgggcggagcacgagcacgcc
gggctgaagagcacgttctcgatctacgacgccgatgattcgcggcggctcatgcagctg
gtcgcgcgggagctcgatctcgacccgaagcgctacacggcccggggtctcgccgcgcag
gtgtcgaacctgaagaacgagctggtcgagcccgaggagttcaaggacaaggcgaagggg
ccgaacgagcgggcggtcgccgaggcgtacgagctctatcagcgccgcctcaaggaggcg
cacgcgctcgacttcgacgacatcatcatgacgacggtgcacctgctgcagtcgcacccg
cacgtcgcggagacctaccgccgccggttccggcacgtgatggtcgacgaataccaggac
accaaccacgcgcagtacatgctggtcaaggagctcgtgggcaagcccgggggcgacctg
gagcccggtgagctctgcgtggtcggtgacgccgaccagtcgatctacgcgttccggggc
gcgacgatccgcaacatcctggagttcgagcgcgactatcccgacgcgcgcacgatcctg
ctggagcagaactaccgctccacccagacgatcctgtcggcggccaacgccgtgatcgac
cgaaacacgtcgcgcaagccgaagcggctctggagtgaccagggcgccggcgagcagatc
gtcgggtacgtcgccgacaccgagcacgccgaggccgactgggttgcccgggagatcgac
cggctctgcgacaaccacgaggtacgccccggcgacgtcgcggtcttctaccgcaccaac
gcccagtcgcgagtgttcgaagaggtgttcatccgcgtcggcctgccctacaaggtggtc
ggcggggtgcgcttctacgagcgcaaggaggtccgcgacgccctgggctacctgcgtgcg
gtggtcaacgacgacgacactgtgagcatccgccgtgtcctcaacaccccgcgccggggc
atcggtgaccgggccgaggcctgcgtcgaggcactgtccacccgcgaccgcatctcgttc
gggcaggcgctgcgcggtgccaagaacgccccgggcatctcgacccgcgcggccaacagc
atcggcgacttcgtgcaactgctcgacgacctgcgcgaacagtcccggacggcgccaccc
gaggagatcctcgaggccgtgctgcagcgttccggcatgctgtccgagttggaggagagc
ctcgacccgcaggaccagggccgggtcgaaaacctccaggagctcgtcagcgtcgcccgc
gaatacaccgaacgcgtcgaggcgcaggccgccgaggacgacgacgcgccggccgccacc
ctcgccggtttcctggagcaggtggccctggtcgccgacgccgaccagatccccagcgac
gaccccgaccaccagggtgttgtcaccctgatgacgttgcacacggccaagggcctcgag
ttccccgtggtgttcctgaccgggctcgaggacggtgtcttcccgcacacccgcgcgctc
ggtgacaacacggagctcgaggaggagcgccgcctggcctacgtcggcatcacgcgtgcc
cggcagcggctctacctgtcgcgggcggtcacccgctcggcgtgggggcagccgcagtac
aacccgccgtcgcggttcaccgacgagttgccgcccgagctggtgcgctgggagcgcacc
gcggggtcctacacgtcgtggtccggcacgggcggaggcgtcggtggtcgcggtggggga
gaccgcgggcgcggtggtggcttcgccgggggtacccccaaagcccagcaactcgcgtcc
cgtctcggcgtcgacgccagcagactcaccacggccagcgagctgaagcagccacccaag
gtcgcaccgggcgaccgcgtcaaccaccagcgctacggcctcggccgcgtggtggtcgtc
gacggccacggccccggcgcccgcgcccagatcgacttcggcgaccaggtcatgtggctg
gtcctccgccacgccccgatcgaaaagatctga
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