Actinoplanes friuliensis: AFR_09740
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Entry
AFR_09740 CDS
T02892
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
afs
Actinoplanes friuliensis
Pathway
afs03030
DNA replication
afs03430
Mismatch repair
afs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFR_09740
03430 Mismatch repair
AFR_09740
03440 Homologous recombination
AFR_09740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afs03032
]
AFR_09740
03400 DNA repair and recombination proteins [BR:
afs03400
]
AFR_09740
Enzymes [BR:
afs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFR_09740
DNA replication proteins [BR:
afs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AFR_09740
DNA repair and recombination proteins [BR:
afs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AFR_09740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
PTCB-BRCT
TerB
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AGZ40237
UniProt:
U5VTV1
LinkDB
All DBs
Position
complement(2101249..2102451)
Genome browser
AA seq
400 aa
AA seq
DB search
MYAVIDVETTGLRTSWHDRVIEMSVVQLDSSGRVQDEWCSLVNPDRDLGPQHIHGISAAE
VRRAPSFDQLASQVTDLLKGRVMVAHNLAFDAMFVASEFRHLGVNVPVGSDLGLCTMRLA
PHFLPSAGRSLVDCRRAAGLPDHRAHSALHDARAAAELFSHYLQLTGTPPPWGSVVDQAA
TLRWPALYFGAAVPVQRRSPEEREPHFLTRLVDRLPRQHEPRADAYLDLLDQALLDRHIS
AIEADGLVAAADAIGLYRADVQILHQRYLAGLASAALADRVVTPAEHKDLDSVAALLGLP
ATAVNRALEAARPSERPVWQLASDDLVVFTGTMDPLREQWEARASAAGLRVGDNVTKKTR
LLVAADPDSMSGKAKKARQYGIPIVHPAAFRSMQETLLPA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcggtgatcgatgtcgagacgaccggcctgcggaccagctggcacgaccgcgtg
atcgaaatgtcggtcgtgcagctggacagctccggccgggtgcaggacgagtggtgcagt
ctcgtgaatccggaccgcgatctgggacctcagcacattcatggcatctcggcggcagag
gtgcgccgggcgccctccttcgaccagctcgcgtcccaggtcacggacctgctgaaaggc
cgggtgatggtggcccacaacctggccttcgatgccatgttcgtcgcctcggagttccgg
catctcggtgtgaacgtcccggtcggcagcgatctggggctgtgcacgatgcgcttggca
ccgcacttcctgccgtccgccggccggagccttgtcgactgccgtcgtgccgcggggctg
ccggaccatcgcgcgcattccgctctgcacgacgcccgggccgctgcggagctcttttcc
cactatctccagctcaccggaacgccgccgccctggggcagcgtggtcgatcaggcggcg
acactgcgctggccggcgctgtacttcggggccgccgtacccgtgcagcgtcgctcgccg
gaggagcgtgagcctcatttcctcacccggctggtcgaccggttgccccggcagcacgag
ccccgggccgacgcctacctggacctgctggatcaggccctgctcgaccggcacatctcg
gcgatcgaggcggacggtctggtggccgccgccgacgcgatcgggctgtaccgggccgac
gtgcagatcctgcatcagcggtacctcgccggcctggcctcggccgcgctggccgatcgg
gtcgtcacgcctgcggaacacaaggatctcgacagtgtcgccgcgctgctggggctgccg
gccacggcggtgaaccgggcactcgaggcggcccggccctcggagcgccccgtctggcag
ctggcatcggacgatctggtcgtgttcaccggcacgatggacccgctgcgggagcagtgg
gaggcccgggcgagcgccgcgggactccgggtcggcgacaacgtcaccaagaagacgcgg
ctgctggtcgccgccgacccggactcgatgtcgggcaaggccaagaaggcccggcagtac
gggatcccgatcgtgcatccggcagcgttccggagcatgcaggaaaccctgctgccggcc
tga
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