Actinoplanes friuliensis: AFR_10430
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Entry
AFR_10430 CDS
T02892
Name
(GenBank) putative DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
afs
Actinoplanes friuliensis
Pathway
afs03030
DNA replication
afs03410
Base excision repair
afs03420
Nucleotide excision repair
afs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFR_10430
03410 Base excision repair
AFR_10430
03420 Nucleotide excision repair
AFR_10430
03440 Homologous recombination
AFR_10430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afs03032
]
AFR_10430
03400 DNA repair and recombination proteins [BR:
afs03400
]
AFR_10430
Enzymes [BR:
afs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFR_10430
DNA replication proteins [BR:
afs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AFR_10430
DNA repair and recombination proteins [BR:
afs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AFR_10430
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFR_10430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AGZ40375
UniProt:
U5VXB9
LinkDB
All DBs
Position
2258816..2261509
Genome browser
AA seq
897 aa
AA seq
DB search
MSDDAQTPRLLLLDGHSLAYRAFFALPVENFSTQTGQPTNAVFGFTSMLINMLRDEKPTH
IVVAFDVSRVSFRTEKYADYKAGRAETPQPFQGQVSLVKEILEALRIPVVEKPGYEADDV
IGTLACQARDAGMEVVISTGDRDAFQLAGEHVTILYPVRGVSEVWRMTPEAIETKYGVPP
GRYRDKAALVGEASDNLPGVPGVGDKTAAKWINQYGGLEGIIAHVDEIKGKAGENLRAHL
ADVMRNYELNALVCDLELPLRPEDVKWQGWDREAVHQVFDALEFRVLRERLYSYLEAVEP
EAESGFDLSGTVLGVGEVAGWLTEHAREAPVGVAVTGRFGRGTGELTGIAVATGDGPAAW
FDPATLDESDERAVAAWLADADRPKVIHEAKPAMLAFRAHGWTLTGVRVDTALAAYLAKP
DQRAYDLTDLALRYLKRELRVDAPQDGQLTLDGLGEEEGTAEQNVMLRARATLDLADTIT
EELSRDDGASQRILAEVEQPLAIVLGEMEHVGIAADTEYLSELEAHFAAEVKSAQQGAHE
VVGREFNLGSPKQLQEILFTERGLPKTKKIKSGYTTDADALQSLFAQTGDPVLEHLLRHR
DVAKLKSTVDGLLKSVSDDGRIHTTFNQTVAATGRLSSTDPNLQNIPIRTEEGRRIRRAF
VVGEGYEQLMTADYSQIEMRIMAHLSGDEALIAAFNSGADFHAATASSVFHVPVEEVVPD
QRRKIKAMNYGLAYGLSAFGLSNQLTITTEEARTLMDEYFQRFGGVRDYLQAVVRRAVQD
GYTATILGRRRYLPDLSSDNRQRREMAERMALNAPIQGSAADIIKIAMLNVDAALRASDL
TSRMLLQVHDELVFDVAPGERAALEELVRREMGGAYPLSVPLEVSVGVGQDWNGADH
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacgacgcccagaccccccgcttgctgctgctcgacgggcactcgctggcttat
cgcgcgttcttcgcgctgccggtggagaacttctcgacgcagacgggccagccgaccaac
gccgtgttcggcttcacctcgatgctgatcaacatgctgcgtgacgagaagcccacgcac
atcgtggtcgccttcgacgtctcgcgcgtgtcgttccgcaccgagaaatacgccgactac
aaggccggccgggccgagaccccgcagccgttccagggccaggtcagcctggtcaaggag
atcctcgaggcgctgcgcatccccgtcgtggaaaaacccggctacgaggccgacgacgtc
atcggcacgctcgcctgccaggcccgcgacgccggcatggaggtcgtcatctccaccggc
gaccgcgacgcgttccagctcgccggcgagcacgtcacgatcctctaccccgtccgcggc
gtctccgaggtctggcgcatgacccccgaggccatcgagacgaaatacggcgtcccgccc
ggccgctaccgcgacaaggccgccctggtcggcgaggccagcgacaacctccccggtgtc
cccggcgtcggcgacaagaccgccgccaagtggatcaatcagtacggcggactcgagggc
atcatcgcgcacgtcgacgagatcaagggcaaagcgggggagaacctccgcgcgcacctg
gccgacgtcatgcgcaactacgagctcaacgccctggtctgcgacctcgagctgccgctg
cgccccgaggacgtcaagtggcagggctgggaccgcgaggcggtgcaccaggtcttcgac
gcgctcgagttccgggtgctgcgggaacggctgtattcgtacctggaggcggtcgagccc
gaggccgagtccggcttcgacctgtccggcaccgtcctgggcgtcggcgaggtcgccggc
tggctcaccgagcacgcccgcgaggcccccgtcggcgtcgccgtcaccggccgcttcggc
cgcggcaccggcgagctgaccggcatcgccgtcgcgaccggcgacggccccgccgcctgg
ttcgaccccgcgaccctcgacgagagcgacgaacgcgccgtcgcagcctggctcgccgac
gccgaccggccgaaggtcatccacgaggccaagccggcgatgctggcgttccgcgcccac
ggctggaccctcaccggtgtccgcgtcgacacggccctcgcggcctacctcgccaaaccc
gaccagcgggcgtacgacctgaccgacctggccctgcgctacctcaaacgcgagctgcgc
gtcgacgccccccaggacggccagctcaccctcgacggcctcggcgaggaggaaggcacg
gccgagcagaacgtcatgctccgcgcccgcgccaccctcgacctcgccgacaccatcacc
gaggagctctcccgcgacgacggcgcctcccagcgcatcctggccgaggtcgagcagccg
ctggcgatcgtgctcggcgagatggaacacgtcggcatcgccgccgacaccgaatacctg
tcggagctcgaggcccacttcgccgccgaggtgaaatcggcccagcagggcgcccacgag
gtcgtcggccgcgagttcaacctgggctcacccaagcagctccaggagatcctcttcacc
gaacgcggcctgcccaagaccaagaagatcaagtccggctacacgacggacgccgacgcc
ctgcagagcctcttcgcccagaccggcgaccccgtcctcgagcacctgctgcgccaccgc
gacgtcgccaagctcaagtccaccgtggacggcctgctcaagtcggtctccgacgacggc
cgcatccacaccacgttcaaccagacggtcgccgccaccggccgcctgtcgtcgaccgac
cccaacctgcagaacatccccatccgcaccgaggaaggccgccgcatccgccgcgccttc
gtcgtcggcgagggctacgagcagctgatgacggccgactacagccagatcgagatgcgc
atcatggcgcacctctccggcgacgaagccctcatcgccgccttcaactccggcgccgac
ttccacgccgcgacggcctcgtcggtcttccacgtcccggtcgaagaggtcgtccccgac
cagcgccgcaaaatcaaggcgatgaactacggcctggcctacggcctcagcgccttcggc
ctctccaaccagctcaccatcaccaccgaagaagcccgcaccctcatggacgagtacttc
caacgttttggaggcgtccgcgactacctccaggccgtcgtccgccgcgccgtccaggac
ggctacaccgccaccatcctcggccgccgccgctacctgccggacctgagcagcgacaac
cgccagcgccgcgaaatggccgaacgcatggctctcaacgcccccatccagggctcagcc
gccgacatcatcaaaatcgccatgctcaacgtcgacgccgccctccgcgcctccgacctc
acgtctcgcatgctcctccaggtccatgacgaactggtcttcgacgtcgccccgggcgag
cgtgctgctctcgaagagctggtgcgccgggagatgggcggggcttaccccctgtccgta
ccgctcgaggtctcggtcggcgtcggccaggactggaacggggccgatcactag
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