Actinoplanes friuliensis: AFR_13785
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Entry
AFR_13785 CDS
T02892
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
afs
Actinoplanes friuliensis
Pathway
afs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFR_13785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afs03400
]
AFR_13785
Enzymes [BR:
afs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AFR_13785
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AFR_13785
DNA repair and recombination proteins [BR:
afs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFR_13785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AGZ41043
UniProt:
U5VVQ8
LinkDB
All DBs
Position
2974854..2975663
Genome browser
AA seq
269 aa
AA seq
DB search
MIMPELPEVESARAVIERGGLRRKIVEVDDSDSYVCRPHLPGQIREALLGRTLVAAHRRG
KSMWCDTSDDGPELGVHLGMSGKIVIADPDGTEIDGGDYWEGRRGSGDYRWSRFALTFAD
GGRLLLVDPRRLGRVRLDPPVESLGPDAATMTPAQFRAALARGTAPVKARLLDQEAVAGI
GNLLADQILWSARINPGRPVGELTPDDVNRLLRATRRAVRSAIAGGGVHTLELIPFRFAG
GHCPRDGAPMEKSTVGGRTSWWCSREQAY
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgatcatgccggagctgccggaggtcgaatcggcgcgtgcggtcatcgaacggggtggc
ctgcggcgcaagatcgtcgaggtggacgactccgactcctacgtctgccgtccacacctt
ccgggtcagatccgggaggcgctgctcgggcggacgctggtggcggcgcatcgccggggc
aagagcatgtggtgcgacaccagcgacgacggtcccgagctgggcgttcacctcggcatg
tcgggcaagatcgtgattgccgacccggacggtacggagatcgacggcggcgactactgg
gagggccggcgtgggtccggtgactaccggtggtcccggttcgcgttgaccttcgccgac
ggtggccgtctgctgctggtcgatcctcggcggctggggcgggtgcgcctcgacccaccg
gtggagtcgctcggcccggacgcggccacgatgacaccggcccagttccgtgcggcgctg
gcccgtggcacggccccggtgaaggcgcgtctgctcgaccaggaggccgtcgccgggatc
gggaacctgctggccgaccagatcctgtggtcggcgcgcatcaacccgggccgtccggtc
ggcgagctcacccccgacgacgtcaatcgtctcctgcgggccacgcgccgggcggtgcgc
tcagcaattgccggcggtggtgtgcacaccctcgagctgattccgttccggtttgcgggc
ggccattgtcctcgcgacggcgcacccatggagaaaagcacggtgggtgggcgtacgagc
tggtggtgcagtagagaacaggcatattag
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