Actinoplanes friuliensis: AFR_16635
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Entry
AFR_16635 CDS
T02892
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03090
RNA polymerase sigma-B factor
Organism
afs
Actinoplanes friuliensis
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afs03021
]
AFR_16635
Transcription machinery [BR:
afs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AFR_16635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
HTH_23
HTH_Crp_2
HTH_3
MarR
Motif
Other DBs
NCBI-ProteinID:
AGZ41605
UniProt:
U5W0X6
LinkDB
All DBs
Position
3594811..3595629
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AA seq
272 aa
AA seq
DB search
MNASVADACRTHQPRRSGQFPPTDADKRANEMVIALAAMAPDDPRRAALRRRTIEAWLPM
AQRLGRRYAGRGENLDDLQQVAMVGLIKSVDRFDAERGDDFVGFAVPTILGELRRHFRDR
TWSMRVPRKVQEMRLAINEANATLFHKLNRLPTVADISQHLGVSEEDVLEGLEGGRAYRA
TSLSTPVAADATVVLADTLAEEEHGYDLVEIQLALGPALARLTARERQILAMRFWGNQTQ
SVIAEKVGVSQMHISRILSTTLAKLRTELTVD
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcatcggttgccgacgcctgccgcacacaccagccccgcaggtccggccaattc
ccgcccaccgacgccgacaagcgtgccaacgagatggtcatcgccctcgcggccatggct
ccggacgatcctcgccgggccgccctgcgccgccggaccatcgaggcctggctgccgatg
gcgcagcggctgggccgtcgttacgccgggcgcggcgagaacctcgacgacctgcagcag
gtcgccatggtcggactgatcaaatcggtcgaccggttcgacgccgaacgcggtgacgac
ttcgtcgggttcgcggttcccaccatcctcggtgagctccggcgtcacttccgcgaccgc
acctggtcgatgcgggtgccccgcaaggtgcaggagatgcggctggccatcaacgaggcc
aacgcgacgctcttccacaagctcaaccggctgcccaccgtcgccgacatctcgcagcac
ctcggtgtcagcgaggaggacgtgctcgaaggactcgagggtggccgggcctaccgggcg
acctcgctgtccacgccggtcgccgccgacgccacggtcgtgctggccgacacgctggcc
gaggaggagcacggctacgacctggtcgagatccagctggccctcggcccggcgctggcc
cggctcaccgcccgcgagcggcagatcctggccatgcggttctggggcaaccagacgcag
tcggtcatcgccgagaaggtgggcgtctcgcagatgcacatctcccggatcctgagcacc
accctggccaagctgcgcaccgaactcaccgtcgactga
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