Actinoplanes friuliensis: AFR_17875
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Entry
AFR_17875 CDS
T02892
Name
(GenBank) putative pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
afs
Actinoplanes friuliensis
Pathway
afs00040
Pentose and glucuronate interconversions
afs01100
Metabolic pathways
afs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AFR_17875
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFR_17875
Enzymes [BR:
afs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AFR_17875
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AGZ41853
UniProt:
U5VXY1
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Position
3864968..3865951
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AA seq
327 aa
AA seq
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MRKHLRQLVLGASAGATALALTGVGIIATTSASASTPVPLAAVDQLVGWATQNGGTTGGG
SAATTTVTSASALTSAVGSTSASVIRVSGTINCSGMLRVRSNKTIIGNSGAAIVGCGLNI
NGDRNVIIRNLTFRNWNDDAINVQTSATNIWIDHNTFSNGYDGAVDVKRGSDFVTVSWNR
VFNHDKAMLLGHSDDNASQDTGHLRVTYHHNWFDASTQRHPRVRFGNPVHVYNNFYYRNS
GYGVASTEGAGVLVENNSFDGVSDPYHLGEGDSGPGTLVARGNLLVGSGSGQTGGSVKTI
PYGYTLDAAGNVKSIVTASAGAGRISL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaacacttgcgccaactcgtgctgggcgcttccgccggtgcgaccgcactcgct
ctcaccggcgtcggcatcatcgcgaccacgtccgcctcggcgtcgacaccggtacccctc
gccgcggttgaccagctggtcggctgggcgacccagaacggcggcaccaccggcggtggc
agcgccgcgaccaccacggtgaccagcgcgtccgcactgacctcggcggtcggctccacc
tcggcgtcggtcatccgggtctccggaacgatcaactgctccggcatgctgcgggtgcgc
tccaacaaaaccatcatcggcaattccggcgcggcaatcgtcggctgcggcctgaacatc
aacggcgatcgcaacgtcatcatccgcaatctgacgttccgcaactggaacgacgacgcc
atcaacgtccagacctcggccaccaacatctggatcgatcacaacaccttcagcaacggc
tacgacggcgccgtcgacgtcaaacgcggctccgacttcgtgaccgtttcctggaaccgc
gtcttcaaccacgacaaagccatgctgctcggccacagcgacgacaacgcgagccaggac
accggccacctccgcgtcacgtaccaccacaactggttcgacgcgtcgacccaacgccac
ccgcgggtccgcttcggcaaccccgtccacgtctacaacaacttctactaccgcaacagc
ggctacggcgtcgcctccaccgaaggcgccggcgtcctcgtcgaaaacaactccttcgac
ggcgtctccgacccgtaccacctgggcgaaggcgactccggcccgggcacgctggtcgcc
cgcggcaacctgctcgtcggctccggctccggccagacgggcggcagcgtcaaaaccatc
ccgtacggatacaccctcgacgccgccggcaacgtcaagtccatcgtgacggcgagcgcg
ggcgcgggccgaatctccctctga
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