Actinoplanes friuliensis: AFR_20530
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Entry
AFR_20530 CDS
T02892
Name
(GenBank) putative ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
afs
Actinoplanes friuliensis
Pathway
afs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFR_20530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afs02000
]
AFR_20530
Transporters [BR:
afs02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AFR_20530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
TctC
BBS7_GAE
Motif
Other DBs
NCBI-ProteinID:
AGZ42378
UniProt:
U5VZF2
LinkDB
All DBs
Position
complement(4476094..4477311)
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AA seq
405 aa
AA seq
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MPPLARRRVVTAAATTALLLLSACSAPDSGGSAQDDGGEVPAKPGKAVTLNILDVAGNLQ
LTQGMIDDFVSKNSGVVSKVTYSKSPAPELVGKVKAQQNANRVDIDLVLTGVDGLSAGIE
QGLWNPLLTKYADRLPGVQEYLPGAAAMQKLAGDSGVTVTYYPSGPLIEYLPAKVPNPPK
TAQELLDYAKANPGAVQYARPSNSGPGRTFLMGLPYLLGDSDPKDPTGGWDKTWAYLGEL
NKYVTLYPSSTGETMKNLANGSAKIIASTTGWDINPRVLGTVPKEAAIGTLEGFHWVTDA
HYAVVPKGVSTDKQSAILLLLAHMLTKEQQAKAYDKGYFYPGPAVKDVDLAMAPADSRAA
IEEFGRPEYPDLIAKNPLEVPLGSKELVAAFDRWDREIGGAKVAK
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgccaccactcgcccgccgccgcgtcgtcactgccgccgccaccaccgccctgctgctg
ctcagcgcctgcagtgcccccgactccggaggatccgcccaggacgacggcggtgaggtg
cccgccaagcccggcaaggccgtcacgctgaacatcctcgacgtcgccgggaacctccag
ctcacccagggcatgatcgacgacttcgtcagcaagaactccggtgtggtcagcaaggtg
acctactcgaagtcaccggcgccggaactcgtcgggaaggtcaaggcccagcagaacgcg
aaccgcgtcgacatcgacctggtgctgaccggtgtcgacgggctgtccgccggcatcgag
cagggcctgtggaacccgttgctgacgaagtacgccgaccgccttcccggcgtacaggag
tatctgcccggggccgcggccatgcagaagctggccggggattccggggtgaccgtgacc
tactacccgtccgggccgctgatcgaatatctgcccgccaaggtgccgaacccgccgaag
acagcgcaggagctgctcgattacgccaaggccaacccgggcgcggtgcagtacgcccgc
ccgtcgaactcggggccgggccgcaccttcctgatgggcctgccttacctgctcggtgac
tccgaccccaaggacccgacgggcggctgggacaagacgtgggcctacctgggtgagctc
aacaagtacgtgacgctctacccgtcgagcaccggcgagacgatgaagaacctcgccaac
ggctccgcgaagatcatcgcctcgacgaccggctgggacatcaacccgcgggtgctcggc
accgtgcccaaggaagccgcgatcgggaccctggaaggctttcactgggtcaccgacgcg
cactacgccgtggtgcccaagggtgtctcgaccgacaaacagtccgcgatcctgctgctg
ctcgcgcacatgctcaccaaggaacagcaggccaaggcttacgacaagggctacttctac
cccggcccggcggtcaaggacgtcgacctggccatggccccggcggacagccgcgcggcg
atcgaggagttcggacggccggagtatcccgacctgatcgccaagaaccccctggaggtg
ccgctcggctcgaaggaactggttgccgccttcgaccggtgggaccgcgagatcggtggc
gccaaggtggccaagtga
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integrated database retrieval system
