Actinoplanes friuliensis: AFR_26320
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Entry
AFR_26320 CDS
T02892
Name
(GenBank) ATP-dependent RNA helicase HelY
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
afs
Actinoplanes friuliensis
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afs03019
]
AFR_26320
Enzymes [BR:
afs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AFR_26320
Messenger RNA biogenesis [BR:
afs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AFR_26320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
MTR4-like_stalk
wHTH-PRTase_assc
MTR4_beta-barrel
Motif
Other DBs
NCBI-ProteinID:
AGZ43526
UniProt:
U5W6E2
LinkDB
All DBs
Position
complement(5717821..5720553)
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AA seq
910 aa
AA seq
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MAEFPALEDFMLDVGFDLDDFQRQSCEALERGSGVLVCAPTGAGKTVVGEFAVHLALRAD
GSGIRRKCFYTTPIKALSNQKYHDLVERYGAEQVGLLTGDNVINGDAPVVVMTTEVLRNM
LYSGSASLQGLAYVVMDEVHYLADRFRGAVWEEVIIHLPASVTLVSLSATVSNYEEFADW
LVTVRGQTEVVVSEHRPVPLWQHMLVGKRMFDLFHDADAARKHDVHPELLRYTREMLRRL
ELTDRTSGPGWQGRGGRTRRWQPPPRAEVVDRLDRANLLPAILFIFSRAGCDAAVQQCLA
GGLRLTNADERAEIRRIAQAKVASIPSEDLSVLGYWEWLDGLERGVAAHHAGMLPAFKEA
VEECFVRGLVKAVFATETLALGINMPARCVVLERLVKFNGEAHVDLTPGEYTQLTGRAGR
RGIDIEGHAVVLWSPEVDPRHVAGLASTRTYPLRSSFRPSYNMAVNLVGTVGADKARDLL
ESSFAQFQADRSVVGLARQVQRNLETMRTYGDEGACHHGDFDEYFGIRIAIADRERAIAR
QGVTQRRAAAVSSLEKLRVGDVIRVPQGRRAGLAVVLEPVNGGFGEPRPLVLTQDRWAGR
VSPADFPGAVDVLERIRVPKHFNHRSPAARRDLAAMVSATGLDRHTGGSGRRGRNKGAAP
GEDAEIALLKVQLRQHPCHACPDREEHARFAERRHRLARDTDALRDKVSGRTGSLARTFD
QVCAVLAGRGYLTADGEVTDSGRMLGRIWTEADLLVAECLRRGVWEGLAPEELAGAVSMV
LYESRREGDERASVPKGATTVAVDDCHKLWAEIESDEAAHGLSLTREPDPGFVWPMYRWA
RGEPLAKVLASGHNYESDMPAGDFVRWARQVLDLLAQLKDASSASQGVRDTARKAITAIN
RGVLAYQTAL
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
gtggccgagttcccggcgctcgaggacttcatgctcgacgtcgggttcgacctcgacgat
ttccagcggcagtcctgcgaggccctcgagcgcggcagcggggtgctggtctgtgcgccc
accggcgccggcaagacggtggtgggtgagttcgcggtgcacctcgcgctgcgggccgac
ggctccggcatccgccgcaagtgtttctacaccacgccgatcaaggccctgtccaaccag
aaataccacgacctggtggagcgctacggcgccgagcaggtcggtctgctcaccggcgac
aacgtcatcaacggcgacgcacccgtggtggtcatgaccaccgaggtgctgcgcaacatg
ctctactccggctcggccagtctccagggcctggcctacgtcgtgatggacgaggtgcac
tacctcgccgaccgcttccgcggcgcggtctgggaggaggtcatcatccacctcccggcg
tccgtgacgctggtctcgctgtcggccacggtcagcaactacgaggagttcgccgactgg
ctcgtgaccgtccgcggtcagaccgaggtcgtggtcagcgagcaccggccggtcccgctg
tggcagcacatgctggtcggcaagcggatgttcgacctgttccacgacgccgacgcggcc
cgcaagcacgacgtgcacccggagctgctgcgatacacccgcgagatgctgcgtcggctc
gagctgaccgaccggacgtccgggccgggctggcagggccgcggcgggcgcacgcgccgc
tggcagccgccgccgcgggccgaggttgtcgaccggctcgaccgggccaacctcctgccc
gcgatcctgttcatcttcagccgggcgggttgtgacgcggccgtgcagcagtgcctggcc
ggcgggctgcggctcaccaacgccgacgagcgcgccgagatccgccgcatcgcgcaggcc
aaggtcgcgagcatcccgtccgaggacctgtcggtgctgggttactgggagtggctcgac
gggctggagcgcggcgtcgccgcccaccacgccggcatgctgcccgccttcaaggaagcc
gtcgaggagtgttttgtccgcggcctggtcaaggccgtcttcgcgaccgagaccctcgcg
ctgggcatcaacatgcccgcgcggtgcgtggtgctcgagcgcctggtgaagttcaacggt
gaagcgcacgtcgacctcaccccgggggagtacacccagctgaccgggcgcgccggtcgc
cggggcatcgacatcgagggtcacgcggtcgtgctgtggagccccgaggtcgacccgcgg
cacgtggccggtctcgcctcgacccgcacctatccgctgcggtcgagcttccgcccgtcc
tacaacatggcggtcaacctggtcgggaccgtcggcgccgacaaggcccgcgacctgctg
gagtcgtcgttcgcgcagttccaggccgaccgctcggtggtcggcctggcccggcaggtg
cagcgcaacctcgagaccatgcggacgtacggcgacgagggcgcctgccaccacggcgac
ttcgacgaatacttcggcatccgcatcgccatcgccgaccgcgagcgggccatcgcccgg
cagggtgtcacgcagcgccgtgcggccgcggtgtcctcactggagaagctccgcgtcggt
gacgtcatccgggtgccccagggccgccgcgcgggtctggccgtggtcctggagcccgtc
aacggcggtttcggtgagccacgcccgctggtgctcacccaggaccgctgggcgggccgg
gtcagcccggccgacttccccggtgcggtcgacgtcctcgagcgcatccgggtgccgaaa
cacttcaaccaccgctcgcccgcggcccgccgcgacctggccgccatggtcagcgccacc
ggcctcgaccggcacaccggcggctccggccgtcgcggccgtaacaagggtgccgccccc
ggcgaggacgccgagatcgcgctgctcaaggtgcagctgcgccagcacccgtgccacgcc
tgtcccgaccgggaggagcacgcccggttcgccgagcgccgccaccgcctcgcccgcgac
accgacgccctgcgcgacaaggtctccgggcggacggggtcgctggcccgcaccttcgac
caggtctgcgcggtgctcgccggccggggttacctcaccgccgacggcgaggtgaccgac
tccgggcggatgctcggccgcatctggacggaggccgacctgctggtcgccgagtgcctg
cgccgcggtgtctgggagggcctggcccccgaggagctcgcgggtgcggtgtccatggtg
ctctacgagtcgcgccgcgagggcgacgagcgggcgtcggtgcccaagggcgcaacgacg
gtcgctgtcgacgactgtcacaagctgtgggccgagatcgagtccgacgaggccgcgcac
ggcctgtcgctgacccgggagcccgatccggggttcgtctggccgatgtaccggtgggcc
cgcggtgagccgctggccaaggtgctggcgagcgggcacaactacgagtccgacatgccg
gcgggcgacttcgtccgctgggcgcgccaggtgctggacctgctggcccagctcaaggac
gcgtcgtcggcctcgcagggtgtccgcgacaccgcgcgcaaggcgatcaccgcgatcaac
cggggagtgctggcctaccagacggcactctga
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