Actinoplanes friuliensis: AFR_34915
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Entry
AFR_34915 CDS
T02892
Name
(GenBank) putative ATP-dependent dsDNA exonuclease C subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
afs
Actinoplanes friuliensis
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afs03400
]
AFR_34915
DNA repair and recombination proteins [BR:
afs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AFR_34915
Archaeal homologous recombinant proteins
AFR_34915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
DUF4763
DUF503
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AGZ45239
UniProt:
U5W7W9
LinkDB
All DBs
Position
complement(7624522..7626990)
Genome browser
AA seq
822 aa
AA seq
DB search
MAGFTVFRDETTVDFTDADYFALVGPTGSGKSTVLDGICFALYGTVPRWGGSRGIGNALA
PSATEARVRLVFESAGSRYVATRVVRRDGRGNVKTAGAGLQLMPPGFDVTRLDTGMSLED
LGDVLAGTPAEMEGAVVEAVGLPYEQFTSCVILPQGQFADFLHAKPATRQQILVNLLGLH
VYEEVQARASTRATKAEAQLATIDQLLAGLVDADDEAVEAAEVRLTAMRELTQAVETAVP
QLSVVRDREAELAAARDAVAEELAALARVRTPAASTKVAEAAAAARAGASDAAQGVRIAE
EREDKVRGELAAAGDAGSLGLLLDRHVELDRLTGQAEWFAGEVSVAEVEHQDAVAAAELA
RAAHNGAEQLLEQARLDYAEAQTLDRAAALRAHLTAGHDCPVCAQPVTEVPPMPEGSAVQ
MAERSGKAARSAADVASTAFRQRDAVARELERGLDRKRAQLEQHKSRLQEVRAALADSPG
VDALRRRLDELTKLQKKLDEAGADVRTARETQRRAQAAVAAADEQQRAAWRSFDAVRDSV
GRFSPPPADRDDLAAAWSALTAWAEVSKRQREEARAEAAAAVEAAHAETQRARAAVVELF
TANGLSAPASGADADLIRAAAVAAERAAAAWQRLVDRREQAREFAEQRAALLRDGRVAKA
LAGHLRANNFERWLLEEALDLLVDGGSRILRELTGGQYDLMHDKGEFFVIDHHDAGLRRG
VRTLSGGETFQASLALALALSEQLAGMSTTAASLESIVLDEGFGTLDAATLDVVAATLEN
LAARGDRMVGVVTHVNALAERVPVRFEVHKDARTAYVERVGL
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggccgggttcacggtgttccgcgacgagaccaccgtcgacttcaccgacgctgactac
ttcgcgctggtcgggccgaccggctccggaaagtccacggtgctcgacggcatctgtttt
gccctctacggcacggtgccgcgctggggcgggagccggggcatcggcaacgccctcgcc
ccgtcggcgaccgaggcccgggtgcggctggtcttcgagtcggccggctcgcgctatgtc
gccacccgcgtggtgcgccgcgacggccgcggcaacgtcaagaccgccggtgccggtctc
cagctcatgccgcccggcttcgacgtcacccgcctcgacacgggcatgagcctcgaggac
ctcggtgacgtgctcgccggcaccccggccgagatggaaggcgccgtcgtcgaggcggtc
gggctgccctacgagcagttcaccagctgcgtcatcctgccgcagggtcagttcgccgac
ttcctgcacgccaagccggccacccggcagcagatcctggtcaaccttctcggtctccac
gtctacgaggaggtccaggcccgggcctccacccgcgccaccaaggccgaggcccagctg
gccaccatcgaccagctgctcgccggtctcgtcgacgccgacgacgaggcggtcgaggcc
gccgaggtgcgcctgaccgcgatgcgcgagctcacccaggccgtcgagaccgcggttccg
cagctcagcgtggttcgtgatcgtgaggccgagctggccgccgcccgcgacgccgtcgcc
gaggagctggccgcgctggcccgggtgaggaccccggccgccagcaccaaggtcgcggag
gccgcagccgccgcccgggccggcgcctccgacgcagcccagggtgtgcggatcgccgag
gagcgcgaggacaaggtgcgcggtgagctggccgccgccggtgacgccggctcgctgggc
ctgctgctcgaccgccacgtcgagctggaccgtctcaccggccaggccgagtggttcgcc
ggtgaggtctcggtcgccgaggtcgagcaccaggacgccgtcgccgccgccgagctggcc
cgggccgcccacaacggcgccgagcagctcctcgagcaggcccggctcgactacgccgag
gcgcagacgctggaccgcgcggccgcgctccgcgcccacctgaccgccggtcacgactgt
cccgtgtgtgcccagccggtcaccgaggtcccgccgatgccggagggctcggccgtgcag
atggcggaacgctccggcaaggccgcccggtccgcggccgacgtcgcctcgaccgctttc
cggcagcgtgacgccgtcgcccgcgagctcgaacgcggcctcgaccgtaaacgcgcccag
ctcgaacagcacaagtcccggctccaggaggtgcgggccgcgctggccgactcgcccggg
gtcgacgcgctgcgccggcggctcgacgagctgaccaagctgcagaagaagctggacgag
gcgggcgccgacgtccggacggcgcgggagacccagcgccgtgcccaggccgccgtggcc
gcggccgacgaacagcagcgcgccgcctggcgctcgttcgacgccgtgcgcgacagcgtg
gggcgcttctcgccgccgcccgccgaccgtgacgacctggccgcggcctggtcggcgctg
accgcatgggccgaggtgtccaagcggcaacgcgaagaggcccgtgccgaagcagccgcc
gccgtcgaagccgcccacgcggagacccagcgggcccgcgcggccgtcgtcgagctcttc
accgccaacggtctgagcgcgcccgcttcgggtgccgacgccgacctgatccgcgccgcc
gcggtcgctgccgaacgcgcggcggcagcgtggcagcggctcgtcgaccgccgcgaacag
gcccgcgagttcgccgagcagcgcgccgcgctgctgcgcgacggccgggtcgccaaagcc
ctggccgggcacctgcgcgccaacaacttcgaacgctggctcctcgaggaagccctcgac
ctgctggtcgacggtggctcccggatcctgcgcgagctgaccggcggccagtacgacctg
atgcacgacaagggcgagttcttcgtcatcgaccaccacgacgcgggccttcgccgcggc
gtccgcacgctgtccggcggcgagacgttccaggcctccctggcgctggccctcgccctc
tccgaacagctcgccggcatgtccaccacggcggccagcctcgagtcgatcgtgctcgac
gaaggcttcggcacgctggacgcggccacgctggacgtcgtggcggcgactctggaaaac
ctcgccgcccgcggtgaccgcatggtcggcgtggtgacccatgtgaacgcgctggccgaa
cgtgtcccggtccgcttcgaggtgcacaaggacgcgcgtacggcctatgtagaaagggtt
ggtctgtga
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