Actinoplanes friuliensis: AFR_35935
Help
Entry
AFR_35935 CDS
T02892
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
afs
Actinoplanes friuliensis
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afs03016
]
AFR_35935 (truB)
Enzymes [BR:
afs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AFR_35935 (truB)
Transfer RNA biogenesis [BR:
afs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AFR_35935 (truB)
Prokaryotic type
AFR_35935 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Saf-Nte_pilin
RP1-2
Motif
Other DBs
NCBI-ProteinID:
AGZ45443
UniProt:
U5W8A5
LinkDB
All DBs
Position
complement(7852034..7852915)
Genome browser
AA seq
293 aa
AA seq
DB search
MNVDGLIVVDKPAGMTSHDVVARVRRLAKTRRVGHGGTLDPMATGVLIIGVNRATRLLTY
VIGSEKSYAGTIRLGQSTVTDDAEGDVTVTAATDGVTDEGIRAGLAAQTGEIDQVPSAVS
AIKVNGQRAYKRVRDGEVVELAARRVTVSRLDVLDIRREQGVVDVDVDVTCSSGTYIRAI
ARDLGATLGVGGHLTALRRTQVGGLSLAEAATLPELEERAPDVISLSMADAARQAFPQRA
ADAEETRVLRHGGPLEPVGIDGPYAVFDPEGDLLAIVSERGGKARAEIVLSPA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtcgacgggctcatcgttgtggacaagccggccgggatgacctcgcacgatgtg
gtcgcgcgggtgcggcggctcgccaagacgcggcgggtggggcacggggggacgttggat
ccgatggcgaccggtgtgctgatcatcggggtcaaccgggctacgcggctgctcacgtac
gtgatcgggtcagagaagagttacgccgggacgattcggctggggcagtcgacggtgacc
gacgacgccgagggtgatgtcaccgtgaccgcggccacggacggggtcaccgacgagggg
atccgggccgggctcgctgcgcagaccggtgagatcgatcaggtgcccagcgcggtcagt
gcgatcaaggtgaacgggcagcgggcgtacaagcgggtgcgggacggtgaggtggtcgag
ctggccgcgcgccgggtgaccgtgtcgcggctggacgtgctggacatccggcgggagcag
ggcgtggtcgacgtggatgtcgacgtgacgtgttccagcggcacctacatccgggccatc
gcccgggatctcggtgccacgctcggtgtgggcggtcatctcacggccctcaggcgtacg
caggtgggcggcctgtccctcgcggaggcggcgacgctgccggagctggaggagcgcgcc
cccgatgtgatctcgctgtcgatggccgacgccgcacggcaggctttcccgcagcgtgcc
gccgacgccgaggagacgcgtgtgctgcggcacggcggaccgctcgagccggtgggcatc
gacgggccgtacgccgtgttcgaccccgagggtgatctgctggcaatcgtttcggagcgt
ggcggcaaggcacgcgccgagattgtgctcagccccgcctag
DBGET
integrated database retrieval system
