Actinoplanes friuliensis: AFR_36525
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Entry
AFR_36525 CDS
T02892
Name
(GenBank) putative ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
afs
Actinoplanes friuliensis
Pathway
afs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AFR_36525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afs03019
]
AFR_36525
03009 Ribosome biogenesis [BR:
afs03009
]
AFR_36525
03036 Chromosome and associated proteins [BR:
afs03036
]
AFR_36525
Enzymes [BR:
afs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AFR_36525
Messenger RNA biogenesis [BR:
afs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AFR_36525
Ribosome biogenesis [BR:
afs03009
]
Eukaryotic type
90S particles
RNase
AFR_36525
Prokaryotic type
rRNA processing factors
AFR_36525
Chromosome and associated proteins [BR:
afs03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AFR_36525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AGZ45561
UniProt:
U5WCB9
LinkDB
All DBs
Position
complement(7977840..7978625)
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AA seq
261 aa
AA seq
DB search
MSISDKRRRPSTEPLEEAFGIPFEPGLLERALTHRSYAYENGGLPTNERLEFLGDSVLGV
VITSALFHNHPDLPEGQLAKLRASVVNMHALADVARTLGPAGLGPHLLLGKGEETTGGRD
KASILADTLEALLGAIYLEHGLDMAGEVIHRLFDPLMAESAGRGAALDWKTSLQELTAAL
GLGVPDYVIDDAGPDHAKTFTAWVVVAGERYGGSDGRSKKQAEQRAAAAAWRTLTERAEA
ETPPPAVAGGGHTELPEAAGR
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcagtgacaagcgccggcggccctcgaccgaacctctggaggaggcgttcggc
atcccgttcgagcccggcctgctcgagcgcgccctcacgcaccgctcctacgcgtacgag
aacggtgggctgccgaccaacgagcggctggagttcctgggcgactcggtgctgggtgtc
gtgatcacttcggcgctcttccacaaccaccccgacctgcccgagggtcagctggcgaag
ctgcgggcgagtgtggtcaacatgcacgcgctcgccgacgtcgcccgtacgctcgggcct
gcgggtctgggtccgcacctcctgctcggtaagggtgaggagacgaccggtggccgtgac
aaggcgagcatcctggccgacacgctggaggccctgctcggcgcgatctacctggagcac
gggctggacatggccggcgaggtgatccaccggctcttcgacccgctgatggcggagtcg
gccgggcgcggcgcggcactggactggaagacgagcctgcaggagctgaccgcggcgctg
ggcctgggtgtgcccgactacgtgatcgacgacgccgggccggaccacgcgaagacgttc
acggcctgggtcgtcgtcgccggtgagcgctacggcggctcggacgggcgcagcaagaag
caggccgagcagcgggcggccgcggcggcgtggcgcaccctcaccgagcgggccgaggcg
gagaccccgccgcctgcggtggccggtggcggccacaccgagctgcccgaggccgccggc
cggtga
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