Actinoplanes friuliensis: AFR_36685
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Entry
AFR_36685 CDS
T02892
Name
(GenBank) Integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
afs
Actinoplanes friuliensis
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afs03032
]
AFR_36685
03036 Chromosome and associated proteins [BR:
afs03036
]
AFR_36685
03400 DNA repair and recombination proteins [BR:
afs03400
]
AFR_36685
DNA replication proteins [BR:
afs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AFR_36685
Chromosome and associated proteins [BR:
afs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AFR_36685
DNA repair and recombination proteins [BR:
afs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AFR_36685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HC2
Motif
Other DBs
NCBI-ProteinID:
AGZ45593
UniProt:
U5W8T7
LinkDB
All DBs
Position
complement(8005885..8006775)
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AA seq
296 aa
AA seq
DB search
MNKAELVEALAARLGDRKTATAALDAVISEVQNAVTKGDRVAITGFGVFEKRARNARTAR
NPRTGEPVKVKKTSVPAFKPGTGFREMVASGKVAKATTAKKTTAAVKSTATKATATKATA
TKTAAAKTTAAKAAPAKSTATKTAAKATATKAAPAKTAATKTAAAKTTASKATTAKATPA
KKTATKSTAAKSTATKAAPAKSTATKTAAAKTLATKTAPAKTATKTAAAKTLASKTTTAK
ATPAKKAATKSTAAKSTATKAAPAKKTTASKTTAAAKSTPASKATTARTTAARKTR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcagagctcgtcgaggcgctcgccgcccgactgggggaccggaagacggcg
acagcagcgctcgatgcggtcatcagcgaggtgcagaacgccgtaaccaagggcgatcgc
gttgccattaccggtttcggagtcttcgagaagcgggcgcgcaatgcgcgtaccgcgcgc
aatccgcgcaccggtgaaccggtgaaggtgaagaagacgtccgtccccgcattcaaaccc
ggaaccggtttccgggagatggtcgcgagcggcaaggtggccaaggccacgactgcaaag
aagaccacggcagcagtgaagtccactgccaccaaggccaccgccacgaaggccaccgcc
accaagacggcggcggccaagaccactgcggcaaaggctgctccggccaagtcgaccgcc
accaagacggcggctaaggccacggcgaccaaggctgctccggccaagactgccgccacc
aagacggcggcggccaagaccacggcttccaaggcgaccacggcgaaggccacgcccgcg
aagaagaccgccaccaagtcgacggctgccaagtcgactgccaccaaggctgctccggcc
aagtcgaccgccacgaagacggcggcggccaagaccctggcgaccaagacggctccggcc
aagaccgccaccaagacggcggcggcgaagaccctggccagcaagaccacgacggccaag
gccacgccggccaagaaggccgccaccaagtcgacggctgccaagtcgactgccaccaag
gccgcgccggccaagaagacgaccgccagcaagaccacggcggccgccaagtcgactccg
gcgagcaaggccacgaccgcgcgtacgactgcggcccgcaagacccgctga
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