Actinoplanes friuliensis: AFR_39150
Help
Entry
AFR_39150 CDS
T02892
Name
(GenBank) putative ADA-like regulatory protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
afs
Actinoplanes friuliensis
Pathway
afs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFR_39150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afs03000
]
AFR_39150
03400 DNA repair and recombination proteins [BR:
afs03400
]
AFR_39150
Enzymes [BR:
afs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AFR_39150
Transcription factors [BR:
afs03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AFR_39150
DNA repair and recombination proteins [BR:
afs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFR_39150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF1707
DUF7437
Motif
Other DBs
NCBI-ProteinID:
AGZ46084
UniProt:
U5WAE5
LinkDB
All DBs
Position
8522633..8524048
Genome browser
AA seq
471 aa
AA seq
DB search
MELDLERCYRAVDSRDQRFDGWFYTAVRTTGIYCRPSCPAVTPKRENVTFYPSAAAAQRG
GFRACRRCRPDAAPGSPEWDVRADTVGRAMRLIADGVVDRAGVPGLASRLGYTERHLNRM
LTAELGAGPLALARAQRAQTARILIETTDLGLAEIAFASGFGSVRQFNDTIQEVYARSPS
ELRQRRAVRQPEAGTITLRLAYRAPLHIGALLGFLAARALPGIEDADVTTYRRGLSLPHG
SATVSLTPGDRWVSATLRLADVRDLAPAVARCRRLFDLDADPAAVDGTLSADPALAAQVK
AEPGVRVPRTADGFELAVRAIVGQQVSVSSARTTLSRLLGPVTPGELRGFPSAEEVAELP
DESFRMPAARRESIRALAHAVADGRLDLDPGADREESVARLLELPGVGAWTAGYVAMRAI
GDPDVFLPTDVAAQRGAEALGLPHSPKALAAHAESWRPWRSYALMRLWRSA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggagttggacctggaacggtgctaccgggccgtcgacagccgtgaccagcggttcgac
ggctggttctacacggccgtgcgaaccaccggcatctactgccggccctcctgcccggcc
gtgacacccaagcgggagaacgtcaccttctatcccagcgccgcggcggcacagcggggt
ggtttccgtgcctgccgccggtgccggcccgacgccgcgcccgggtcgccggagtgggac
gtccgcgccgacacggtcgggcgggcgatgcggctcatcgcggacggtgtggtcgatcgg
gcgggggtgcccggcctggcgagccggctcggatacaccgagcggcacctcaaccgcatg
ctcaccgctgagctcggcgccggaccgctcgcgctggcccgggcccagcgcgcacagacc
gcgcggatcctcatcgagaccaccgacctcggcctcgccgagatcgcgttcgcttccggg
ttcggcagcgtgcggcagttcaacgacacgatccaagaggtgtacgcgcggtcgcccagc
gagctgcggcagcgccgggccgtccggcagcccgaggcgggcacgatcacgctgcggctg
gcctaccgggcgccgctgcacatcggtgcgttgctggggttcctggccgcgcgggcgctg
ccggggatcgaggacgccgacgtcaccacgtaccggagggggttgagtctgccgcacggg
agcgcgacggtctcgctcacgccgggtgaccggtgggtctccgcgacgctgcggctggcg
gacgtccgggacctggcgcccgcggtcgcccgctgccggcgcctcttcgacctcgacgcc
gatccggccgccgtcgacggcacgctgagtgccgatcctgcgctcgctgcccaggtcaaa
gccgagcccggggtacgcgtcccgcgtaccgccgacggttttgaactggcggtccgagcc
atcgtcggccagcaggtctcggtgtcgagcgctcggacgaccctgagccgcctgctcggc
cccgtcacaccgggtgagctgcggggcttccccagcgccgaggaggtggccgagctgccg
gacgagtcgttccggatgccggccgcacgccgggagagcatccgggcgctggcgcacgcc
gtggccgacggccggctcgacctggaccccggcgccgaccgcgaggagtccgtggcccgg
ctcctcgaactgcccggcgtcggcgcgtggaccgccggttacgtggcgatgcgcgcgatc
ggcgacccggacgtcttcctgcccaccgacgtggcggcgcagcgcggtgccgaagcgctg
ggcctgccgcactcccccaaggccctggccgcacacgccgagagctggcggccctggcgc
tcgtacgccctgatgagactgtggagatcagcatga
DBGET
integrated database retrieval system
