Actinoplanes friuliensis: AFR_39210
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Entry
AFR_39210 CDS
T02892
Name
(GenBank) putative exoribonuclease large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
afs
Actinoplanes friuliensis
Pathway
afs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AFR_39210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afs03400
]
AFR_39210
Enzymes [BR:
afs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AFR_39210
DNA repair and recombination proteins [BR:
afs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AFR_39210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGZ46096
UniProt:
U5WDV7
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All DBs
Position
8542955..8544172
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AA seq
405 aa
AA seq
DB search
MTQPETPKSSADEPWPVRVVSQKLSAWIAKLGWVWVDGQVAQISRRPGASVVFLTLRDPS
ADLSLTVTAHRDVLDAGAPELAEGARVTMHAKPEFYPARGSLSLRADEIRQVGLGELLAR
LERLKKLLGAEGLFARERKRRLPFLPQRVGLITGRASAAERDVLMNTRRRWPSVDFRVIN
VPVQGPTAVPQIIDAMKVLDNDETVDVIVIARGGGSVEDLLPFSDEALCRAVFGCRTPVV
SAIGHETDAPLIDYVADVRASTPTDAAKRIVPDLAEETTLIQQARRRLDRAVITLVDRES
HRLESWRSRPVLARPEVLVDQRETEVNALRDRATRSLDQRLRRADDDLRHTLARLRALSP
KATLERGYAIVQRPDGHVVRAADEVETGDLLRVRLADGELRAEVQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
gtgacccagcccgagacgccgaagtcgagcgccgacgagccgtggcccgtccgggtcgtc
agccagaagctcagcgcctggatcgccaagctcggctgggtctgggtcgacggccaggtc
gcccagatcagccgccgtccgggcgccagcgtggtcttcctgacgctccgcgacccgtcg
gccgacctcagcctcaccgtgaccgcccaccgcgacgtgctcgacgcgggcgcacccgag
ctggccgagggtgcccgggtgacgatgcacgccaagcccgagttctacccggcgcggggg
tcactgagcctgcgcgccgacgagatccgccaggtgggcctgggtgagctgctcgcccgg
ctcgaacgcctgaagaagctgctcggcgcggagggactcttcgcccgtgagcgcaagcgg
cggctgccgttcctgccgcagcgcgtagggctgatcaccgggcgggcctccgcggccgag
cgggacgtcctgatgaacacccggcgccgctggccgtccgtggacttccgggtgatcaac
gtgcccgtgcagggaccgaccgcggtgccgcagatcatcgacgcgatgaaggtgctcgac
aacgacgagaccgtcgacgtgatcgtgatcgcccgcggcggcggcagcgtcgaggacctg
ctgcccttctccgacgaggcgctctgccgggcggtcttcggctgccgcaccccggtcgtc
agcgccatcgggcacgagaccgacgccccgctgatcgattacgtcgcggacgtccgcgcg
tccacgcccaccgacgccgccaagcgcatcgtgcccgacctggccgaggagacgacgctg
atccagcaggcccgccgccggctggaccgcgcggtgatcacgctggtcgaccgcgagtcg
caccgcctcgagtcgtggcgctcacggccggtgctggcccgccccgaggtcctcgtcgac
cagcgggagaccgaggtcaacgccctgcgcgaccgggcgacccgcagcctcgaccagcgg
ctccggcgcgccgacgacgacctgcggcacaccctggcccggctgcgggcgctgtcaccg
aaggcgaccctcgaacgcggttacgcgatcgtgcagcgcccggacggtcacgtggtcagg
gcggcggacgaggtggagacgggcgaccttctccgggtacggctggcagacggcgagctc
cgagcggaagtgcagtga
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