Actinoplanes friuliensis: AFR_40885
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Entry
AFR_40885 CDS
T02892
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
afs
Actinoplanes friuliensis
Pathway
afs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFR_40885 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afs03019
]
AFR_40885 (groEL)
03110 Chaperones and folding catalysts [BR:
afs03110
]
AFR_40885 (groEL)
03029 Mitochondrial biogenesis [BR:
afs03029
]
AFR_40885 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afs04147
]
AFR_40885 (groEL)
Enzymes [BR:
afs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AFR_40885 (groEL)
Messenger RNA biogenesis [BR:
afs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AFR_40885 (groEL)
Chaperones and folding catalysts [BR:
afs03110
]
Heat shock proteins
HSP60 / Chaperonin
AFR_40885 (groEL)
Mitochondrial biogenesis [BR:
afs03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AFR_40885 (groEL)
Exosome [BR:
afs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AFR_40885 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
AFR_40885 (groEL)
Exosomal proteins of breast cancer cells
AFR_40885 (groEL)
Exosomal proteins of colorectal cancer cells
AFR_40885 (groEL)
Exosomal proteins of bladder cancer cells
AFR_40885 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
CbiA
Motif
Other DBs
NCBI-ProteinID:
AGZ46431
UniProt:
U5WEQ7
LinkDB
All DBs
Position
complement(8903243..8904865)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFDEEARRGLESGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEGTFEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMALKRGIE
AAVASVSEELTKIAKDVETKEQIASTASISAGDSTVGEIIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISAYFMTDAERMEAVFDDPYILIANSKISAVKDLLPVLEKVMQ
GGKPLIIIAEDVEGEALATLVVNKVRGTFKSVAVKAPGFGDRRKAMLDDIAILTGATVVS
EEVGLKLDAADLSLLGQARKVVITKDETTIVDGAGNAEQIQGRVNQIRAEIEKSDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALVQA
GKTAFDKLDLVGDEATGANIVRVALDAPLRQIAVNAGLEGGVVSEKVRNLELGHGLNAAT
GEYVDLLAAGIIDPAKVTRSALQNAASIAALFLTTEAVVADKPEKNPAPAGGPGGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcatttgacgaggaagctcgtcgcggcctcgagagtggtatgaac
cagctcgccgacgccgtcaaggtgacgctcggccccaagggccgcaacgtcgtgctcgag
aagaagtggggcgctcccaccatcaccaacgatggtgtgtcgatcgccaaggagatcgag
ctcgagggcaccttcgagaagatcggcgccgagctggtcaaggaggtcgccaagaagacc
gacgacgtggccggcgacggcacgacgacggcgaccgtgctggcccaggcgctggtccgt
gagggcctgcgcaacgtggccgccggtgcgaacccgatggcgctcaagcggggcatcgag
gctgctgtcgcctctgtctccgaggagctcaccaagatcgcgaaggacgtggagacgaag
gagcagatcgcctccaccgcctccatctccgccggtgactccacggtcggcgagatcatc
gctgaggccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagagcaacacc
ttcggtctcgagctcgagctcaccgagggcatgcgcttcgacaagggctacatctcggcg
tacttcatgaccgacgccgagcgtatggaggccgtcttcgacgacccctacatcctcatc
gcgaacagcaagatctccgcggtcaaggacctgctccccgtcctcgagaaggtcatgcag
ggcggcaagccgctcatcatcatcgccgaggacgtcgagggcgaggccctggccaccctg
gtcgtcaacaaggtgcgcggcaccttcaagtccgtcgccgtcaaggccccgggcttcggc
gaccgccgcaaggccatgctggacgacatcgcgatcctcaccggtgcgaccgtcgtcagc
gaagaggtcggcctcaagctcgacgccgctgacctgtccctgctgggccaggcgcgcaag
gttgtcatcaccaaggacgagacgaccatcgtcgacggtgccggcaacgccgagcagatc
cagggccgggtcaaccagatccgggccgagatcgagaagtcggactccgactacgaccgc
gagaagctgcaggagcgcctggccaagctggccggcggcgttgcggtcatcaaggtcggc
gcggccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggcggccgtcgaagagggcatcgtccccggtggtggcgtcgcgctcgtgcaggcc
ggcaagaccgcgttcgacaagctcgacctggtgggcgacgaggccaccggtgcgaacatc
gtccgcgtcgcgctggacgccccgctgcgccagatcgctgtcaacgccggcctcgagggt
ggcgtcgtctccgagaaggtgcgcaacctcgagctgggtcacggcctgaacgccgcgacc
ggcgagtacgtcgacctcctggccgcgggcatcatcgacccggccaaggtcacccgctcg
gcgctgcagaacgccgcgtcgatcgccgctctgttcctcacgaccgaggcggtcgtggcg
gacaagccggagaagaacccggccccggccggtggccccggcggcggagacatggacttc
taa
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