Actinoplanes friuliensis: AFR_41790
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Entry
AFR_41790 CDS
T02892
Name
(GenBank) putative ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
afs
Actinoplanes friuliensis
Pathway
afs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFR_41790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afs02000
]
AFR_41790
Transporters [BR:
afs02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AFR_41790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SidF
Motif
Other DBs
NCBI-ProteinID:
AGZ46612
UniProt:
U5WCB8
LinkDB
All DBs
Position
complement(9108778..9110553)
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AA seq
591 aa
AA seq
DB search
MVSKTRVVAAAGVAVALGFTAACGGGSDSDSNGGGTSGGKSAYNAAITSVVNPSTAKGGT
LNLMTAQDADSWDPARGYYAFVWDMNRFYTRKLVDYAAVPGKEGLKLVPDLATADAEISA
DKKTYTYKLKPGLKFDDGAAITSKDIKYGIERIFAQDVVPGGPTYLIDQLDQGQNYPGPY
KDTDPNKLGLKTVETPDDSTIIFKLKAPFADFPYLLAMPGAGPVPQKRDTGAQYGAKPAS
SGPYMITDYQPAKSLKLERNPNWDASTDTIRKALPDAINVTITTNADDMDQRLEAGTADL
DIGQTGVQAAARARILQDPAKKANSDTPATGFIRYAGIVQKVAPFENIECRKAVIYASDP
TSLQAARGGPVAGGDIGTSMLPPNIAGSDPSYDPYGRAQGKPQVDKAKQALAACGKPTGF
DTTIAVRNNKPAEVKTAEALQAALKTVGINAKIDQYDGAQVASVTGSPDNVHKKGYGIII
GGWAADWPSGTGYLQALADSRYIQKNGNYNLPEINDPAIDGLFDQAATETDLSKADAIYK
QLNTKVMEGAYYLPFVFDKALNYRNPRLTNVYIHDTFGMVDFQSLGVSDGK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
gtggtcagcaagacgagggtggtggcggccgcaggggtcgccgtcgcgttgggcttcacc
gccgcgtgtggtggcggttccgacagcgacagcaacggaggcgggacctccggtggcaag
agtgcgtacaacgcggcgatcacgtcggtggtcaacccgagcacggccaagggcggcacg
ctcaacctgatgacggctcaggacgccgactcgtgggaccccgctcgtgggtactacgcg
ttcgtgtgggacatgaaccgcttctacacgcgcaagctcgtcgactacgccgctgtcccg
ggcaaggagggcctcaagctggtccccgacctggcgaccgcggacgcggagatcagcgcg
gacaagaagacgtacacctacaagctgaagccgggcctcaagttcgacgacggcgcggcg
atcacgtccaaggacatcaagtacggcatcgagcgcatcttcgcgcaggatgtcgtcccg
ggtggcccgacgtacctgatcgaccagctggaccagggtcagaactaccccggcccgtac
aaggacaccgacccgaacaagctgggcctgaagactgtcgagacgcccgacgactcgacc
atcatcttcaagctcaaggcgccgttcgccgacttcccgtacctgctggcgatgccgggc
gcaggcccggttccgcagaagcgggacaccggcgcgcagtacggcgccaagccggcctcc
tcgggtccgtacatgatcacggactaccagccggccaagagcctcaagctcgagcgcaac
ccgaactgggacgccagcaccgacacgatccgcaaggctctgccggacgccatcaacgtc
acgatcaccacgaacgctgacgacatggaccagcgtctggaggccggcacggcggacctc
gacatcggccagaccggtgtccaggcggccgctcgcgcccggatcctgcaggacccggcc
aagaaggccaactcggacacccccgccaccggcttcatccggtacgcgggcatcgtccag
aaggtcgcgccgttcgagaacatcgagtgccgcaaggccgtcatctacgcgtcggacccg
acgtcgctgcaggcagcgcgtggtggcccggtcgccggcggtgacatcggcacgagcatg
ctgcccccgaacatcgcgggctcggacccgtcgtacgacccgtacggccgggcgcagggc
aagccgcaggtcgacaaggccaagcaggcgctcgccgcctgtggcaagccgaccggtttc
gacaccacgatcgcggtccggaacaacaagccggccgaggtcaagaccgccgaggcgctg
caggccgctctgaagacggtcggcatcaacgccaagatcgaccagtacgacggtgctcag
gtcgcgtcggtcaccggctcgcccgacaacgtgcacaagaagggctacggcatcatcatc
ggcggctgggccgctgactggccctccggcacgggttacctgcaggcgctcgccgacagc
cggtacatccagaagaacggcaactacaacctgcccgagatcaacgacccggcgatcgac
gggctgttcgaccaggctgccacggagaccgacctctccaaggcggacgccatctacaag
cagctcaacaccaaggtcatggaaggcgcttactaccttccgttcgtgttcgacaaggcg
ctcaactaccgcaacccgcggctgacgaacgtctacatccacgacacgttcggcatggtg
gacttccagtccctcggcgtcagcgacggcaagtag
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