Anoxybacter fermentans: BBF96_02505
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Entry
BBF96_02505 CDS
T05768
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aft
Anoxybacter fermentans
Brite
KEGG Orthology (KO) [BR:
aft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aft03032
]
BBF96_02505
03400 DNA repair and recombination proteins [BR:
aft03400
]
BBF96_02505
Enzymes [BR:
aft01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BBF96_02505
DNA replication proteins [BR:
aft03032
]
Prokaryotic type
DNA Topoisomerases
BBF96_02505
DNA repair and recombination proteins [BR:
aft03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBF96_02505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF6532
Motif
Other DBs
NCBI-ProteinID:
AZR72361
UniProt:
A0A3S9SVN4
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All DBs
Position
563539..565620
Genome browser
AA seq
693 aa
AA seq
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MPDKLVIVESPAKAKTIRKFLGKEFRVEASMGHVIDLPKSQLGVDIENNFKPKYITIRGK
GKILNSLKKAAKKSKEVYLATDPDREGEAISWHLARALKLDTDKPCRIEFNEITKKAVQN
AIKSPRVIDQHRVDAQQARRVLDRLVGYKLSPLLWNKVRKGLSAGRVQSVAVRIICDRER
EIEAFVPEEYWTIDAQLSDKNETFVARLYRIDNKKFKISNEKEAKEHETLLKKEKFIVEE
VKEMERKRNPYPPFTTSSLQQAASNFLGFSTKKTMFVAQQLYEGLDLPQGTVGLITYIRT
DSTRISDEAQVAARKYIEKKFGSKYLPEKKRYYRAREGAQDAHEAIRPTDVFLEPDSIQK
YLTPDQYKLYKLIWERFVASQMSPAINKIFTIDIKAGKYLFRLTGTTTIFQGFQIIDSFG
SKKKDQELPELKKGDILNLIKIIPEQHFTQPPARYTEASLVKTLEEKGIGRPSTYAPIVA
TIQQRGYVVKDGKTLKPTELGFIVTDLLTEHFPDVIDVEFTAMLEDQLDKVEDGSVDWVK
VIKDFYKTFEQRLEQARKEMENVELESEVTDVICEKCGRNMVVKHGRYGKFLACPGYPEC
KNTQPYIIKTGVKCIECEDGELIERRTKKGRIFYGCSNYPECEFITWNKPVKEKCPECGA
FLIEKQTKKNKYYQCVRKECGYKQKEGVKNDQD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgataaattagtaattgtcgaatcaccagcaaaagcaaaaacaattagaaaattt
ttaggaaaagaatttcgagttgaagcgtcaatggggcatgtgattgatctccctaaaagt
cagttaggtgtagatatagagaataattttaaacctaaatatataactatacggggaaaa
ggaaagattttaaattctctaaagaaggctgctaaaaaaagtaaagaagtatatctggca
actgacccggaccgtgaaggtgaagccataagttggcatcttgccagagctttaaaactt
gatacagataaaccatgtcgaattgaatttaatgaaattactaaaaaggcggttcaaaat
gctattaaaagtccaagagttattgatcagcatagagttgatgctcaacaggcacgtcga
gttctggatcgtctggttggttataaactaagtcccttgctttggaacaaagtccgtaaa
ggtttgagcgctggccgggttcagtcagtggctgtccggattatttgtgatcgtgaacgg
gagattgaagcctttgttccggaagaatattggaccattgatgctcaactttcagataaa
aatgagacttttgttgctagactttatcggattgataataaaaaatttaaaatttcaaac
gagaaagaagctaaagaacatgaaactttgttgaaaaaggagaaatttattgttgaggaa
gttaaagaaatggaacggaagcgtaacccctatccaccctttactaccagtagcttacag
caggctgcttcgaattttttaggtttcagtaccaaaaagactatgtttgtggctcaacag
ctttatgaaggtctggatttaccacagggaacagttggtcttataacgtatattcgtacc
gattcgacacgtatttcagacgaagcccaggtagcggctagaaaatatattgaaaaaaag
tttggttctaaatatctgcctgagaaaaaacgttattaccgggccagggaaggggctcag
gacgcccatgaagctatcagacccactgatgtttttttagaacctgattctattcaaaaa
tatttaacacctgatcaatataaactatataaactaatatgggaacggtttgtagccagt
cagatgagccctgcaattaacaaaatctttacaattgatattaaagctggtaaatatctc
ttccgtttgacgggaactactactatttttcaaggttttcaaattatagattcatttgga
tctaagaaaaaagatcaagagttacccgaattaaagaaaggagatattctgaatcttata
aaaatcatacctgaacagcattttactcaaccaccagcccgttatactgaagcaagtctg
gtaaaaaccttagaagagaaggggattggtcgtcccagtacttatgctcctattgtggca
actattcagcagcggggttatgtggttaaggatggtaagactttaaaacctacagaatta
ggatttattgtcactgatcttttgactgaacattttccagatgttatagatgttgaattt
acagctatgttagaagatcagttagataaagtagaagacggttctgtagattgggtaaag
gtaataaaagatttttataaaacatttgaacagagattggaacaggctagaaaagagatg
gaaaatgttgaacttgaatctgaagttacggatgtgatttgtgaaaaatgcggccggaat
atggtagttaaacacggccgttatggaaaatttctggcctgtccgggatatcctgagtgt
aaaaacactcagccatatattattaagacaggggttaagtgtattgagtgtgaggatggt
gaactaattgagcgtcggactaaaaaaggccggatattttacggatgcagtaactatcct
gaatgtgaatttatcacctggaataaacctgttaaggaaaaatgtcctgaatgtggagct
tttttaatagagaaacagactaaaaagaataaatattatcaatgtgtcagaaaagaatgt
ggatataagcaaaaagagggtgtaaaaaatgaccaggattag
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