Anoxybacter fermentans: BBF96_06915
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Entry
BBF96_06915 CDS
T05768
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
aft
Anoxybacter fermentans
Pathway
aft02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aft00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BBF96_06915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aft03021
]
BBF96_06915
Transcription machinery [BR:
aft03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBF96_06915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
HTH_20
tify
Motif
Other DBs
NCBI-ProteinID:
AZR73138
UniProt:
A0A3S9SY21
LinkDB
All DBs
Position
complement(1537211..1538344)
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AA seq
377 aa
AA seq
DB search
MAKKKAKEKNKEKKIELQRDVLDAVNSLIERGEQKGVLTYDEIMDALEDKELEPDVIDRI
YELIAEKNIDVVDNISEKNDDKDDQKDEDNSPDLDLSIPDGVGIDDPVRMYLKEIGKVPL
LTAEEEVELAKRMEQGDEEAKRRLAEANLRLVVSIAKKYVGRGMLFLDLIQEGNLGLIKA
VEKFDYRKGYKFSTYATWWIRQAITRSIADQARTIRIPVHMVETINKLIRVSRQLLQELG
REPTPEEIAKEMDLTPEKVREIMKIAQEPVSLETPIGEEEDSHLGDFIEDEDAPAPAAAA
SYKLLKEQLGDVLDTLSEREKRVLELRFGIEDGRPRTLEEVGKEFGVTRERIRQIEAKAL
RKLRHPSRSKKLKDYLD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaagaaggccaaggaaaaaaataaagaaaagaaaatagaattacagcgtgat
gtcttagatgctgtaaattctttgatagagcgtggtgaacagaagggtgtcctgacatat
gatgagattatggatgccctggaagataaagaactggagcctgatgtgattgatcgtatt
tatgaattaattgccgaaaagaatatagatgttgtagataatatttctgaaaaaaatgat
gataaagatgaccaaaaagatgaagataactcccctgacctggatttaagtattcctgac
ggagttggtatagatgacccggtacggatgtatttaaaagaaattgggaaagtaccactt
cttactgctgaagaagaagtggaattggctaagcgaatggaacaaggagatgaagaagcc
aagcgaaggctggcagaagctaatttgcgtcttgttgtaagtattgctaaaaaatatgtt
ggccggggaatgttattccttgacttaattcaggaaggtaatcttggcctgattaaagct
gttgagaagtttgattatcggaaaggttataagttcagtacctatgctacatggtggatt
cgtcaagctataacccggtctattgctgatcaggccagaacaattcgtattccagttcat
atggtagaaaccataaacaaattaatccgggtttcccgccaactcttacaggaattaggt
cgtgagcctactcctgaagagattgcaaaggagatggacttgacgccagaaaaggtcagg
gagattatgaaaattgctcaagaacctgtttctttagagacgcctattggggaagaagaa
gatagtcatctgggagactttatcgaagatgaagatgctccagctcctgcagcagcagct
tcttataagttattaaaagaacagttaggtgatgtattggatactctcagtgagcgtgag
aaacgtgttttagagcttcgttttggaattgaggatggacggcctagaacactagaggaa
gttggaaaagaatttggcgtaacccgggaacggattcgtcaaattgaggccaaagcatta
agaaagttacgtcatcctagcaggagtaagaagctaaaagattatttagattaa
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