Anoxybacter fermentans: BBF96_15275
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Entry
BBF96_15275 CDS
T05768
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aft
Anoxybacter fermentans
Pathway
aft03030
DNA replication
aft03430
Mismatch repair
aft03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBF96_15275
03430 Mismatch repair
BBF96_15275
03440 Homologous recombination
BBF96_15275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aft03032
]
BBF96_15275
03400 DNA repair and recombination proteins [BR:
aft03400
]
BBF96_15275
Enzymes [BR:
aft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBF96_15275
DNA replication proteins [BR:
aft03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBF96_15275
DNA repair and recombination proteins [BR:
aft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBF96_15275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF655
DUF2577
Motif
Other DBs
NCBI-ProteinID:
AZR74615
UniProt:
A0A3Q9HS89
LinkDB
All DBs
Position
3402606..3406001
Genome browser
AA seq
1131 aa
AA seq
DB search
MPDFVHLHLHSEYSLLDGAVRIDKLIERVKEYGMPAVAVTDHGVMYGAIKFYRQAKAAGI
KPILGCEVYVAPRTRFDKEARVDEHSFHLTLLAENNEGYKNLLKLVSKASLEGFYYRPRI
DLDLLRQHSEGLIALSGCLKGQIPTLLFQEQWEQAEGILEEYLLIFGENNFFIEIQDQGL
EEQRILNPRLIRLAQKKGIPLAATNDVHYLDREDAYVHDILLCIQTGKTISDPDRLRFTS
DQFYLKSQDEMVKLFEDWPEALSNTVKIAERCSVELDFDNFHLPHFVVPSEKRPVEYLKE
LCFNGAKKRYGHIDKKIKERLNYELNMIEKMGFTSYFLIVHDFVSYARKKGIPVGPGRGS
AAGSLVAYVLEITDIDPIKYGLIFERFLNPERVTMPDIDIDFCYVRRDEVIRYVTEKYGK
DHVAQIITFGTMAARAVVRDVGRVLEMPYSKVDKIARLIPEAPGMTIDKALDSSPDLKKI
YHKDKEAQRLIEIGRKLEGLPRHASTHAAGVVISKDSLHNYTPIQRSKEGITTQYDMEDL
EALGLLKMDFLGLRTLTVINDTLEMLKERGIEIDIRNLPLNDPRAYQLLREVKTAGIFQM
ESRLYQRLCKDLQPENFEDIIAMMALGRPGALQSGMVEDYIRCRHGEKQVEYLHPALKPI
LKETYGLILYQEQVMKIASQLANYTLGEADILRRGMGKKKKELIKQHRERFVKGAVQNNI
PAEIANTIFDLMEYFGGYGFNKSHSAAYALIAYQTAYLKANYPVEFMAATLTSVMGSSKK
VAYYIEECQKMGIEVLPPDVNQSGIHFTVVGPNRIRFGLAAVKNVGKSAIAELVKGRENR
PYSSLTDLCHRVDTGKVNVRVLESLIKCGALDSLGGRRSQYMAILENVVQSAQYAQRHKV
RGQISLVESMEGYEKQFNDQLPDLPEYPKEEILKMEKELLGLYLTAHPLDPYREKYHQWG
RERVLELMELEDGDEVVVCGIISDLKLHTTKKGQIMAFITLEDWSGSVEGVVFPSQYNKA
QYLIKRDQPVLILGKVNHKEDEISLIVDQILPLDQEFLIISLHIEEYGQDVLEELERGLK
KHNGSIPVILKLIKNGKITTVITDERYWVNKEEITIEFLEQIVGKSNFCFS
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattttgtacatttacatttacattctgagtatagtttactcgatggagctgtc
cggattgataaactaatagagagagttaaagaatacggaatgcctgctgttgcggttaca
gatcatggtgttatgtacggagcgataaaattttaccgccaggctaaggcggccgggatt
aaacccatacttggctgtgaagtctatgtggcaccccggacccgttttgataaagaagcg
cgggttgatgaacattcctttcatttgactttattggccgagaataatgagggatataaa
aatcttttaaagttggtttcaaaagcatctttagaaggtttttattatcgcccgcggatt
gatctagatttgctgcggcagcatagtgaaggtttgatagcattaagtggctgccttaag
ggtcaaattcctactttactttttcaggaacagtgggaacaggcagagggaatcttagag
gaatatcttctgatctttggtgaaaataatttctttattgaaattcaggatcagggatta
gaagaacaacgcattttaaaccccagattaatccggttagcacaaaagaaagggattcct
ctcgctgcaaccaatgatgttcattatcttgaccgtgaagatgcctatgttcatgatatt
ttactctgtattcagaccggtaaaactatatctgaccccgatcggttaagatttaccagt
gatcagttttatttaaaaagtcaagatgagatggttaaactttttgaagattggcctgaa
gctttgagtaatactgtaaagattgcggaacgctgtagtgttgaattggattttgataat
tttcatctaccacactttgtggtgccgtcagaaaaaagaccggtggaatatttgaaagaa
ctttgttttaatggagcaaaaaagagatatggtcatatagataagaagattaaggaacgg
ttaaattatgagttaaatatgatagaaaagatgggttttacttcatatttcctgatcgtt
cacgattttgttagttatgccagaaaaaaagggattcccgtcgggccggggcggggttcg
gctgcgggaagtctggtagcatatgttctggaaattaccgatattgaccccatcaaatat
ggactgatctttgaacgtttcttaaacccggaacgggttaccatgccggatattgatatc
gatttttgttatgttcgacgagatgaggtaatccgctatgttacagaaaaatatggcaaa
gatcatgtagcccagattattacctttggaacgatggcagcccgggctgttgtccgggat
gtggggcgggttttagaaatgccatactctaaagtggataagattgccagattaatccct
gaggcgccgggaatgaccattgataaagctctcgattcctctcccgatttaaagaaaatt
tatcataaagataaggaggcccaaaggcttattgagatagggcgtaagttagaggggcta
ccccgtcatgcatctactcatgcggcaggggtggtgatttctaaagattctttgcataac
tatacaccgatccaaaggagtaaagaaggaattacaactcaatatgatatggaagattta
gaggctcttggccttttgaagatggattttttgggactacgtactttgaccgttataaac
gatactttagagatgttgaaagaacggggaattgaaattgatataaggaatcttccatta
aatgatcctcgagcctatcagctccttagagaggttaaaacggctggtatttttcagatg
gagtctagactttatcaaaggctttgtaaagacttacaaccggaaaattttgaagatata
attgctatgatggcattagggcgaccgggggcattacagagtggaatggtggaagactat
atccggtgccgtcacggtgaaaaacaggtagagtatttacacccggctttaaaaccaatt
ttaaaagaaacttatggcctgattctttatcaggaacaggtgatgaagattgccagtcag
ttagccaattatacattgggcgaagcagatattttaagaagggggatgggaaaaaagaaa
aaagaactgatcaaacagcatcgggagcgttttgtaaagggagcagttcagaataacatc
cctgctgaaattgctaatactatctttgatttgatggaatatttcggcggttatggattt
aataagagtcatagtgctgcctatgcattgattgcctatcaaacagcatatttaaaagca
aactatccggtagaatttatggctgctactttaaccagtgtgatgggttccagtaagaag
gttgcatattacattgaagaatgccagaagatggggattgaggttttacctccggatgta
aatcagagcggtattcatttcacggtagttggtcccaataggattcgttttggtcttgct
gctgtaaaaaatgttggtaaaagtgctattgctgaactggttaaaggacgtgaaaataga
ccctatagttcattgactgatctctgtcatcgtgtggatacaggcaaggtcaatgtcaga
gttttagaaagcctgatcaaatgtggtgcgttggactcattaggtggacgccgttctcaa
tatatggctattttagaaaatgtggttcaaagtgctcaatatgcgcagcgtcataaagtt
agagggcagatttcacttgttgaaagtatggaaggatatgaaaaacagtttaatgatcaa
cttccagatcttcccgaataccctaaagaagagatactaaagatggagaaagaactttta
gggttgtatcttacggctcatccgctagatccttatcgagaaaaataccatcaatggggc
cgggagagggttttggagttaatggagctggaagatggtgatgaggtggttgtatgtgga
attatcagtgatttaaaacttcataccaccaaaaaaggtcaaataatggcttttattact
ctggaggattggtcaggaagtgtggagggggttgtttttccatcacagtataataaagct
cagtatctaataaaacgagaccagccggttttgattttgggtaaagttaatcataaagaa
gatgaaataagtttgattgtagatcaaattctgccattagatcaagaatttcttattatt
tctttgcatatagaagaatatggtcaagatgttttagaggaattagagaggggattgaag
aaacataatggatcaatacctgttattttaaagttaattaaaaacggaaaaataactaca
gttattactgatgaaagatattgggtaaataaagaagagattactatagagtttttagaa
cagattgtcggaaaaagtaatttttgtttttcttaa
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