Anoxybacter fermentans: BBF96_16010
Help
Entry
BBF96_16010 CDS
T05768
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aft
Anoxybacter fermentans
Pathway
aft03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aft00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBF96_16010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aft03021
]
BBF96_16010
03400 DNA repair and recombination proteins [BR:
aft03400
]
BBF96_16010
Enzymes [BR:
aft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBF96_16010
Transcription machinery [BR:
aft03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBF96_16010
DNA repair and recombination proteins [BR:
aft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBF96_16010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
RAD51D_N
DUF4559
AMIN-like
Spectrin_7
Motif
Other DBs
NCBI-ProteinID:
AZR74745
UniProt:
A0A3Q9HSF8
LinkDB
All DBs
Position
3549512..3550456
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPRIEKVESTDTYGKFVITPLERGFGITLGNSLRRVLLSSLPGAAVTYVKIDGVR
HEFTSIPGVVEDVTDIILNLKGLILKCYSDEPQIIRLDVSGEREVTAADFHTTGDVEILN
PDHHIATLDTDGELHLEATVERGRGYLSAEEAKERKEHVIGLIPVDASFTPIRRVNFTVE
DTRVGRITDFDRLILEVYTNGSVTPEEAVSLAARILQEHLALFSNLTEDIGDVEIMIEKE
EEEKDKIMETTIEELELSVRSSNCLKRAGINTVEELVQKTEEDLMKVRNLGKKSLQEIKE
KLAELGLSLKNSEV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatagagattgaaaagcctcgcatcgaaaaagtcgaatcgactgacacctatggaaaa
tttgtaattactcctctggaaagaggttttgggattactctgggtaattctttacgccgg
gttctcctatcctctttgccaggggcagctgtaacttatgtcaaaatcgatggagttcgc
catgaatttacttctatcccaggtgtagttgaagatgtcactgatatcattctaaattta
aaagggttgattcttaaatgttattctgatgagccacagattattcgtttagatgtatcc
ggtgaaagagaggtaactgctgcagattttcatactaccggtgatgtagaaattttaaat
ccggatcatcatattgctaccctggatactgatggcgaacttcatctggaagcgactgta
gagcgaggcagaggttatttatcggctgaggaagcgaaggaaagaaaagaacatgttatt
ggattgattcctgttgatgcatcctttacacctattcgacgggttaattttacggtagaa
gatactcgtgtaggtcgaataactgactttgaccgtttaatattagaagtttataccaat
ggcagtgttactcccgaagaagctgtcagtctcgcggccagaattcttcaggagcatctt
gctctcttttctaatctgaccgaggatattggtgatgtagagattatgattgaaaaagaa
gaagaagaaaaagataaaattatggaaacaactattgaagagttagagctgtcggtaaga
tcctctaattgtctgaagcgggccggaattaatactgtcgaagagttagttcaaaagacc
gaagaggacctgatgaaggttcgtaatttgggcaaaaaatcacttcaggaaatcaaagag
aaacttgcagaattgggtctttctttaaagaattctgaagtgtag
DBGET
integrated database retrieval system
