Archaeoglobus fulgidus DSM 4304: AF_0373
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Entry
AF_0373 CDS
T00011
Name
(GenBank) transcription initiation factor IID
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
afu
Archaeoglobus fulgidus DSM 4304
Pathway
afu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
afu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AF_0373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afu03000
]
AF_0373
03021 Transcription machinery [BR:
afu03021
]
AF_0373
Transcription factors [BR:
afu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
AF_0373
Transcription machinery [BR:
afu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
AF_0373
RNA polymerase III system
TFIIIB
AF_0373
RNA polymerase I system
SL1/TIF-1B
AF_0373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
RTT107_BRCT_5
MCPsignal
Motif
Other DBs
NCBI-ProteinID:
AAB90862
UniProt:
O29874
LinkDB
All DBs
Position
337798..338349
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AA seq
183 aa
AA seq
DB search
MQDYKIKIENVVASTQIGENIDLNKISREIKDSEYKPKQFPGLVLRTKEPKAAALVFRSG
KVVCTGSKSVEDARRAVKQIVKMLKEIGISVIDEPEVKVQNIVASADLGVDLNLNAIAIG
LGLENIEYEPEQFPGLVYRLDNPRVVVLIFGSGKMVVTGGKSPEDARKAVERISEELRTL
GLM
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattacaagataaaaatcgagaatgttgtggcatcaacccagattggagaaaat
atagatttgaacaagatttctagggaaattaaggactcagaatacaaaccaaagcagttt
cccggactggttttgagaacgaaggagccaaaggctgccgctctggttttcaggagtggg
aaggtcgtgtgcacaggctccaagagcgtggaggacgcaagaagggcggtaaagcaaatc
gtgaagatgctgaaggaaatcggcatttcggtaatcgacgagcctgaggtgaaggttcag
aacatcgtagcttctgcggacctcggagttgatttgaacctcaacgcaatagctatcggt
ctgggacttgagaacattgagtacgagccggagcagtttccgggtctagtttacaggctt
gacaatccgagagttgtcgtgctgattttcggttccggcaagatggttgttacaggcggt
aaaagccctgaagatgctagaaaggctgttgaaaggatttctgaggagctcagaactctg
ggactgatgtaa
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