Archaeoglobus fulgidus DSM 4304: AF_0492
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Entry
AF_0492 CDS
T00011
Name
(GenBank) conserved hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
afu
Archaeoglobus fulgidus DSM 4304
Pathway
afu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AF_0492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afu03019
]
AF_0492
Messenger RNA biogenesis [BR:
afu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
AF_0492
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
AF_0492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N_2
RRP4_S1
RRP40_S1
S1
KH_6
KH_1
ECR1_N
KH_2
Motif
Other DBs
NCBI-ProteinID:
AAB90745
UniProt:
O29758
Structure
PDB
PDBj
LinkDB
All DBs
Position
449529..450200
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AA seq
223 aa
AA seq
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MRKIVLPGDLLSTNPRAAGYGTYVEGGKVYAKIIGLFDQTETHVRVIPLKGRYTPSVGDV
VIGIIREVAANGWAVDIYSPYQAFLPVSENPEMKPNKKPNEVLDIGDAIIAKVLNIDPKM
KVTLTMKDRICRPIRFGRIVAINPARVPRVIGKKGSMIKLLKSELDVQIVVGQNGLIWVN
GDRRKVSIAEEAIYLIEQEAHTEGLTDRVAEFIKRRKADVGIQ
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagatagtactgccaggagatttgctttccacaaatccacgtgccgcaggttac
ggaacgtacgtggaaggtgggaaagtttacgcaaagataataggcctttttgatcaaacc
gagactcacgttagggtaatccctctgaaggggaggtacacaccttccgttggggatgtt
gtgatcggcataataagggaggttgccgccaacggctgggctgttgacatttactcaccc
tatcaggcctttttgcctgtaagcgagaatccggaaatgaagccgaacaagaaaccgaat
gaagttttggatataggtgatgcgatcatagcaaaggttctgaacattgacccaaaaatg
aaggtcactctgaccatgaaagacagaatctgcaggccgataaggttcggcaggatcgtt
gccatcaaccctgcaagggttccgagagtcatcggcaaaaaggggagcatgataaagctg
ctgaagagcgagctcgacgttcagatcgtcgttgggcagaacggtctgatatgggtgaac
ggagaccgcagaaaagtttccatcgccgaggaggcaatctaccttatcgagcaggaggct
catacggaaggtttaacagatagggttgcagaatttataaagaggaggaaggcagatgtc
ggaattcaatga
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