Archaeoglobus fulgidus DSM 4304: AF_0493
Help
Entry
AF_0493 CDS
T00011
Name
(GenBank) ribonuclease PH (rph)
KO
K11600
exosome complex component RRP41
Organism
afu
Archaeoglobus fulgidus DSM 4304
Pathway
afu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AF_0493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afu03019
]
AF_0493
Messenger RNA biogenesis [BR:
afu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
AF_0493
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
AF_0493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AAB90744
UniProt:
O29757
Structure
PDB
PDBj
LinkDB
All DBs
Position
450184..450960
Genome browser
AA seq
258 aa
AA seq
DB search
MSEFNEKPEKLIVDGLRLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPR
EVHPRHLQDPSKAIIRYRYNMAPFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPR
SAIDIFVEVLQADAGSRTACLNAASVALVDAGVPMKGMITSVAVGKADGQLVLDPMKEED
NFGEADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRR
YIEVGEEMDEITEGGEDA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaattcaatgaaaaaccagaaaagttaattgtagatggtttaaggctcgatgga
aggaaattcgacgagctcagaccaattaaaattgaggcaagcgttttaaaaagggctgac
gggtcttgctaccttgaaatggggaagaacaaggtaattgcagcggttttcgggccgaga
gaagtgcatccaagacaccttcaggatccgagcaaggccatcataagatacagatacaac
atggctcctttcagcgttgaagagcgaaagaggccggggcctgacagaaggagcattgaa
atctccaaggtcagcaaggaggcctttgaggcggtgattatgaaagaactctttcctaga
agtgcgattgacatttttgtcgaggttttgcaggctgatgcgggaagcaggacagcctgc
ctgaatgctgcaagcgttgcgctcgtcgatgccggagtgcctatgaagggaatgatcacg
tccgttgcggtggggaaggctgacggacagctcgtcctcgacccaatgaaagaggaggac
aattttggtgaggccgacatgcccttcgcattcctcatcagaaacggaaagattgagtcc
attgcacttctccagatggacggcagaatgacgagggatgaggtaaagcaggcgattgag
cttgcgaagaagggagcactgcagatttacgagatgcagagggaggcgatactcaggagg
tacatagaggtaggagaggagatggacgagataacagagggtggtgaagatgcctga
DBGET
integrated database retrieval system
