Archaeoglobus fulgidus DSM 4304: AF_0900
Help
Entry
AF_0900 CDS
T00011
Name
(GenBank) tRNA intron endonuclease (endA)
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
afu
Archaeoglobus fulgidus DSM 4304
Brite
KEGG Orthology (KO) [BR:
afu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afu03016
]
AF_0900
Enzymes [BR:
afu01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
AF_0900
Transfer RNA biogenesis [BR:
afu03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
AF_0900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AAB90338
UniProt:
O29362
Structure
PDB
PDBj
LinkDB
All DBs
Position
805316..806233
Genome browser
AA seq
305 aa
AA seq
DB search
MIGGDFAVVKAKKSLERRGFGVKRGDKIYLHPLEVVYLQIKGIESFGELEDVLSWAESRM
EDFSTYYFVYEDLRDRGNKVKIQGEFLLTKKPYLPISERKTIRMEEIAEKARNFDELRLA
VVDEESEITYFRVYEPDMMGEQKEELPEIAGILSDEYVITKQTEIFSRYFYGSEKGDLVT
LSLIESLYLLDLGKLNLLNADREELVKRAREVERNFDRRYEVYRNLKERGFVVKTGFKFG
SEFRVYRKVESVDDLPHSEYLVDIADSREIRLIDLARAVRLAQNVRKRMVFAYGKNYLCF
ERVKV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgataggcggagattttgctgtggtaaaggccaagaaaagccttgagaggaggggcttc
ggggttaagagaggggataaaatctaccttcacccgcttgaggttgtttacctccagata
aaggggatagagagctttggagagctcgaagatgtcctgagttgggctgaaagcaggatg
gaggacttctcaacctactacttcgtttacgaggacctgagggatagaggaaacaaggtg
aagattcagggggagtttttgctgacgaaaaagccctacttaccaatttctgaaagaaaa
acaatcagaatggaagaaattgccgaaaaggcaagaaatttcgacgagttaaggcttgct
gtcgttgacgaggagagcgagataacctatttcagggtgtatgagccagatatgatggga
gagcaaaaggaggagcttcccgagatagcaggaattctgtcagatgagtatgtgattaca
aagcagaccgagattttcagcagatacttctacgggagcgagaaaggagatctcgtcaca
ctctcgctgattgagagcctctaccttctcgatttgggaaagctcaatctgctgaacgct
gacagagaagagcttgttaagagagcgagggaggttgagagaaactttgataggaggtat
gaggtttacagaaacctcaaggagagggggtttgtggtcaaaactggcttcaaattcgga
agcgagttcagggtttacaggaaagtcgagagcgttgacgacctgccgcactcggagtac
cttgtagacattgcagacagcagggaaatcaggctcatcgaccttgcaagggctgtaaga
ctggcccagaacgtgaggaagaggatggtctttgcctacgggaaaaactatctctgcttt
gagagggttaaggtttga
DBGET
integrated database retrieval system
