Archaeoglobus fulgidus DSM 4304: AF_1297
Help
Entry
AF_1297 CDS
T00011
Name
(GenBank) cell division control protein 48, AAA family (cdc48-1)
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
afu
Archaeoglobus fulgidus DSM 4304
Pathway
afu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
afu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
AF_1297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afu03019
]
AF_1297
03009 Ribosome biogenesis [BR:
afu03009
]
AF_1297
04131 Membrane trafficking [BR:
afu04131
]
AF_1297
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afu04147
]
AF_1297
Messenger RNA biogenesis [BR:
afu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AF_1297
Ribosome biogenesis [BR:
afu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
AF_1297
Membrane trafficking [BR:
afu04131
]
SNARE
SNARE associated proteins
Others
AF_1297
Autophagy
Aggrephagy
Other aggrephagy associated proteins
AF_1297
Exosome [BR:
afu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AF_1297
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
TIP49
AAA_22
AAA_14
Vps4_C
AAA_lid_PRS2_C
AAA_33
AAA_28
AAA_18
nSTAND3
RNA_helicase
AAA_7
Mg_chelatase
AAA_17
DUF815
NPHP3_N
IstB_IS21
Sigma54_activat
Parvo_NS1
ABC_tran
AAA_3
AAA_24
nSTAND_NTPase5
TsaE
NB-ARC
Zeta_toxin
PhoH
SLFN-g3_helicase
bpMoxR
ATP-synt_ab
Viral_helicase1
PocR
B5
Motif
Other DBs
NCBI-ProteinID:
AAB89948
UniProt:
O28972
LinkDB
All DBs
Position
complement(1156904..1159105)
Genome browser
AA seq
733 aa
AA seq
DB search
MSDKKGEEITLRVAEAFYRDVGRGVARIDPAVMEKYGLQSGDIIEIIGKSTVPAIVWPSY
PEDRGTGIIRIDGSIRSNAGVGIDDKVRIRKVTAKPAEKVTLAPTEPVRLMGGEAYLLRL
LEGRPVIKGQKIRVEVFGHTLTFVITATRPSGVVVVTRNTAIELKEKPAEEVKRAVPDVT
YEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEV
DAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVER
RVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILE
IHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVI
ENLKVTREDFMEALKNIEPSAMREVLVEVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEV
FRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREM
FRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGLEELKDVVVIAATN
RPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSG
ADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKLKITKKHFEEALKKVRPSLTKEDVEK
YEKLIEDFHRMYA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaaaaaggtgaggaaataacccttagagttgctgaagctttctatcgcgat
gttggaaggggtgttgccagaatcgatccagcagtgatggaaaagtacggactgcagagc
ggtgacataatagagattataggaaagagcaccgttccagcaatagtctggccgagctat
ccggaggataggggaaccggaataataaggattgatggcagcattagaagcaacgcaggc
gttggtattgatgacaaagtcagaataaggaaggttacagcaaagccagcagagaaagtt
acactcgctccaacagagccggtaaggctgatgggtggcgaggcgtatctgctgaggctg
cttgaaggcagaccggtcatcaaaggtcagaaaatcagggttgaggttttcggtcacact
ctgacgttcgtaataaccgccaccaggccctcaggagtcgtcgttgtcacgagaaacact
gcgatcgagcttaaggagaagccggccgaggaggtaaagagggctgttcctgacgtaact
tatgaggacataggcggtctgaagagggagcttaggctggtcagagagatgatagagctt
ccattgaagcatcccgagctcttccagaggctcggaatcgagccgcccaagggtgtgctg
ctctacggtccgccgggaactggaaaaacgctgattgccaaggctgtggcgaatgaggtg
gacgcgcacttcatacccatcagcgggccggaaatcatgagcaagtactatggagagagc
gagcagaggctgagggagattttcgaggaggctaaggagaacgctccgtcgataatcttc
atagacgaaatcgactcaattgctcctaagagagaagaggtcaccggagaagttgagaga
agggtcgtcgcccagctgctggcgctgatggacgggcttgaggcaagaggagacgtcata
gtcattgccgctacaaacaggcctgacgcgatcgatcctgcactgagaaggccgggaagg
ttcgacagggagattgagatcggagttccggacaaggagggcaggaaggagattctcgag
attcacaccagaaagatgcccctcgccgaggatgttgaccttgaagagcttgccgagctg
acaaacggatttgttggagcggatctggaagcactgtgcaaggaagcagcgatgcacgcc
ttgaggagagttctgccggagatagacatcgaggccgaggaaattcccgcagaggtcatt
gagaatctcaaagtcacgagggaggacttcatggaggctctgaagaacatcgagccgtct
gcgatgagagaggtgctggtggaggtgcccaacgtcaagtgggaggacatcggtggactt
gagcatgctaagcaggagctgatggaggcagttgaatggccattgaagtatccggaggtg
ttcagggcagcaaacatcaagccgccgaggggaatactgctgttcggcccacccggaacg
ggtaagaccttgctggctaaggctgtggcaaacgagagcaatgcgaacttcatcagcgtg
aaggggcctgagctgctgagcaagtgggttggtgagagcgagaagcacgtcagggagatg
ttcaggaaggcaaggcaggtagctccgtgtgtcatattcttcgacgagatcgacagcctt
gcccccagaagaggcggaattggcgattcacacgtcactgagagagttgtgagccagctc
ctgacggagctcgacggactggaggagctcaaagatgtggtggtcatagccgccaccaac
aggccggacatgattgatccagcgctgctcagacccggaaggcttgaaaggcacatctac
atacctccacccgacaagaaggcgagagtggagatattcaagatacacctcagaggaaaa
ccgcttgcggatgacgtgaacatcgaagagcttgcggagaagacggagggatacagcgga
gcggacatcgaggcagtgtgcagggaggcaggaatgctcgcaatcagggagctcatcaag
ccgggtatgacgagagaggaggctaaagaggcggcgaagaagctcaagattacgaagaag
cactttgaggaagcgctgaaaaaggtcaggccgagcctaaccaaggaggacgttgagaag
tatgagaagttgattgaagatttccacaggatgtacgcttaa
DBGET
integrated database retrieval system
