Archaeoglobus fulgidus DSM 4304: AF_1806
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Entry
AF_1806 CDS
T00011
Name
(GenBank) DNA topoisomerase I (topA)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
afu
Archaeoglobus fulgidus DSM 4304
Brite
KEGG Orthology (KO) [BR:
afu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afu03032
]
AF_1806
03400 DNA repair and recombination proteins [BR:
afu03400
]
AF_1806
Enzymes [BR:
afu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AF_1806
DNA replication proteins [BR:
afu03032
]
Prokaryotic type
DNA Topoisomerases
AF_1806
DNA repair and recombination proteins [BR:
afu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AF_1806
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
DUF1272
ADK_lid
Motif
Other DBs
NCBI-ProteinID:
AAB89443
UniProt:
O28469
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All DBs
Position
1620972..1622963
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AA seq
663 aa
AA seq
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MVMSWLIITEKDNTARRIASILFKDVKTLKKGRVSYYHSPSNDAYVVGLKGHIVELDFPK
ELNNWTKTPLEKLLQAELVKKVKERTISSILKEIAKKADRVTVATDYDREGELIGVEALE
IVKSVNPTVKVDRVRYSAVTEKEIRSAFSKPVKVDFNLANAALARQKIDLIWGATLTRLI
SVHSGRMGKDFLSVGRVQTPTLRLIVDRELEIQNFKPEKYYEIFAEFEGFIAKHPKRYGS
KEEAEKLFAKIGETAKVEEFTRRRMEENRPTPFNTTEFLREASKFMSPHKAMNIAETLYM
NGYISYPRTDNTVYPPTINLIEIVSALSSVFPREAQIVLSQDKITPSRGRRETKDHPPIY
PTGVAKRGELSKDEWTIYELVVRRFLATLAPKAVWDVRRVVLDSNGVKFVANGRQLVEAG
WRDIYIYSKAEETELPLLKKGDVLRILKKRLEEKETKPPGRYSASSLIKMMEKLNLGTKS
TRHEIIQKLVSRRYIHGNPFRPSETAFSVINVLKETAETITLPDMTAKLENEMDLIAEGK
KREPEVVDESREMLLQILRAIDYRKLSKDLREGVKKDKIVGKCPECGGELVVRQSKAGKR
FIGCSNYPDCTFTLPLPQNGTLYITAKQCKEHEIKEVKIRTKKGYWNLGCPYCNYLNWKK
ENS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
ttggttatgagctggcttataataactgagaaggacaacactgccagaaggattgcgtca
attctcttcaaagacgttaaaacgctgaaaaagggtagggtgagttactaccactctcct
tcaaacgacgcctacgttgttgggctgaaaggccacatagttgagcttgacttcccgaag
gagctgaataactggaccaaaactcctcttgagaaacttcttcaggcagagctggtgaaa
aaggtcaaggagaggacgatttcctctattttgaaggaaattgccaagaaggcggacaga
gttacggtcgcaacggactacgacagagagggtgagctgataggagttgaggctctggaa
atcgtcaagtcggttaatccaactgttaaggttgacagggtgaggtacagtgctgttacg
gagaaggagataaggtcagccttctcaaaacccgttaaagttgacttcaacttggccaac
gctgcgctcgcaaggcagaagatagacctgatatggggtgccacactcaccaggctcatc
tcggttcattccggcaggatgggcaaggacttcctgagcgtcggaagggtgcagacgccc
actctaaggctgattgtggacagggagctggaaattcagaacttcaagcccgagaagtac
tacgagatttttgcggagtttgaaggattcatcgcaaagcacccaaagaggtacggcagc
aaggaggaagctgagaaattattcgccaagattggcgaaacggcgaaagttgaggaattc
acaagaaggagaatggaggagaacaggccaacgcccttcaacaccaccgagttcttgagg
gaagcatcgaagttcatgtccccccacaaggcgatgaacatcgctgaaaccctttacatg
aacggctacatcagctaccccagaacggataacaccgtctatccccccaccataaacctc
attgaaatcgtttctgcgctctcatcagtttttccgagggaagctcaaatcgtgctatct
caggataaaataacgccttcaagaggcagaagggaaaccaaggaccacccgccaatatat
cccaccggtgttgcgaagaggggggagctttcaaaggatgagtggacgatttacgagctt
gtggtaaggaggtttctcgcgaccctcgcacccaaagccgtttgggacgttagaagagtc
gttctcgatagcaacggcgtaaagttcgttgccaacggcagacagctcgttgaagcgggc
tggagggacatctacatctactcaaaagctgaggaaaccgagctacccttgctgaagaaa
ggtgacgtcctgagaatactcaagaaaagacttgaggagaaggaaaccaaacctccgggg
agatattctgcttcatccctgatcaaaatgatggagaagctcaatctcggcacgaaatca
acgaggcacgagattattcagaagctcgtcagcagacgctacattcacggtaaccccttc
aggccgagcgaaacggccttttctgtaataaacgtgctcaaggagactgcggagacgata
acgctgccagacatgaccgctaagcttgaaaacgagatggacctcatcgcggaggggaag
aagagggagccggaggttgtggacgagtcaagggagatgctcctgcagatactaagggca
atagattacagaaagctcagcaaagatctgagggagggtgtaaagaaagataaaattgtt
ggaaaatgtccagaatgtggtggagagcttgtggtgagacagtccaaggccggtaagagg
ttcataggttgcagcaactatcctgactgcaccttcacccttccacttccccagaatggg
actttgtacatcacagccaagcagtgcaaggagcacgaaatcaaggaggtcaaaatcagg
acaaagaagggatactggaatctcggatgcccctactgcaactatctcaactggaagaag
gagaacagctaa
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