Archaeoglobus fulgidus DSM 4304: AF_1888
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Entry
AF_1888 CDS
T00011
Name
(GenBank) DNA-directed RNA polymerase, subunit A' (rpoA1)
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
afu
Archaeoglobus fulgidus DSM 4304
Pathway
afu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
afu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AF_1888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afu03021
]
AF_1888
Enzymes [BR:
afu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AF_1888
Transcription machinery [BR:
afu03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
AF_1888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
MnmE_helical
TraB_PrgY_gumN
PPP5
Motif
Other DBs
NCBI-ProteinID:
AAB89365
UniProt:
O28391
LinkDB
All DBs
Position
1700021..1702624
Genome browser
AA seq
867 aa
AA seq
DB search
MVPKRISAIKFEVLSPQEIRRMSVVKIITPETYDDDGFPIDGGLMDTRLGVIDPGLRCKT
CGGKAGECPGHFGHVELAAPVIHVGYAKMIARLLNGTCSECGRILLKDERRDKFIAEIER
RKELNQSYEEVVKEVFRLTKAAKKCPHCGAEQLEVKFDKPTFFYLGEHRLTPKDVREWLE
KIPDDDLPAFGINPKATRPEWFVLTVLPVPPVTVRPSIILETGQRSEDDLTHKLVDIIRI
NQRFMENKEAGAPQQILEDLWELLQYHVTTYIDNEVSGIPPARHRSGRPLKTLAQRLKGK
EGRFRGSLSGKRVNFSARTVISPDPCLSINEVGVPREIAEELTVPIYVTPQNIDMAREFV
LRSEHPKANYIVRPDGRRIRVIESNKEELAEKLEPGWIVERQLMDGDIVLFNRQPSLHRM
SIMAHYVRVLPYKTFRLNPAVCPPYNADFDGDEMNLHVPQSLEAQAEAKILMAVQEHILS
PRFGGPIIGGIHDHISGLYLLTRGEKKFTREEAMELLRSLDISEIPVKDEYTGKEIFSFI
LPDITLEFKAEICQGCEECKGAECEYDAYVIIENGKLLKGTIDEKAVGAFKGIIIDEIAR
KYGKEMAKKFIDDMTQLAIRIISKLGFTVGIDDEDIPPEAAEQIEEVLKEAENEVNRLIE
AYRRGDLEPMPGRSIEETLEMRIMQVLGRARDRAGKIAQRHLGMDNAAVIMAVSGARGSM
LNLTQMAACIGQQSVRGERISRGYTYTNRTLSHFKPGDLGAEARGFVRSSYKKGLSPVEF
FFHAAGGREGLVDTAVRTSQSGYLQRRMINALQDLKVEYDGTVREQTSGALVQFRYGEDG
VDPMRSFRGKPVDVRRIIREVIGEVKK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggtaccgaagaggatttcagccattaaatttgaggttctctccccccaagagataaga
agaatgagtgtggttaaaatcatcactcccgaaacgtacgatgatgatggctttcccata
gacggcgggctaatggacacaaggctgggtgtcatcgaccctggcctgagatgcaagacc
tgcggaggaaaggcaggagagtgtcctgggcacttcggccatgtggagctggctgcaccc
gtcattcacgtcggttacgcgaagatgatagcaaggctccttaatgggacttgcagcgag
tgcggcagaattctgctgaaggatgagaggagagacaagttcatagccgaaattgagagg
agaaaggagctgaaccagagctacgaagaagtcgtgaaagaggtgttcaggcttacaaaa
gcagctaagaagtgtccgcactgcggggcggagcagctggaggttaaattcgacaagcct
accttcttctacctcggagagcacagattaacaccaaaagatgttagagagtggctggaa
aaaattccggatgatgacttaccggctttcggcattaatccaaaggcaacccgccccgag
tggttcgttttaaccgtcctccccgtcccgccggtaacggtaaggccttctattatcctt
gaaaccggtcagaggagtgaggacgacttgacgcacaagctcgttgacataatcagaatc
aaccagaggttcatggaaaacaaggaggccggggcgcctcagcagatactcgaagacctc
tgggagcttctgcagtatcacgtcaccacatacatcgacaacgaggtaagcggaattcct
ccagcaagacaccgcagcggaaggccgctgaaaaccctcgctcagcgtctaaagggtaag
gaaggtaggttcagaggctcactctcaggaaagcgtgttaacttctcggcaagaactgta
atcagcccggatccgtgtctgagcattaacgaagttggtgtgccgagggaaatagccgaa
gagcttacggttcctatctacgtaactccccagaacatagacatggcgagggagtttgtt
ctgagaagcgagcatccgaaagcgaactacatagttaggcctgacggaagaagaatcaga
gttatagaatcgaacaaggaggagcttgccgaaaagcttgaaccgggatggattgtagag
aggcagttaatggacggagacatcgtgctgttcaacagacagccttcgctgcacagaatg
agcatcatggcccactacgtcagagttctgccctacaagaccttcagactcaatccagca
gtttgcccgccttacaacgctgactttgacggagacgagatgaacctccatgtgcctcag
agtctcgaagcgcaggctgaggcgaagattcttatggccgttcaggagcacattctttcc
ccgagattcggagggccaattattggtggaattcacgaccacataagtggtctttacctg
cttacgagaggagaaaagaagttcactagggaggaagccatggagcttctgagaagcttg
gacatttccgaaattcctgttaaagatgagtacaccggaaaggagattttcagcttcatc
cttcccgacataacgcttgaattcaaggcagaaatctgtcaggggtgtgaagagtgcaaa
ggtgcggaatgtgaatacgatgcctacgtgattatagaaaacggcaagctgctcaaggga
acgattgacgaaaaggctgttggggcattcaagggcataataatagacgaaattgccaga
aagtatggaaaggagatggcaaagaagttcatagacgatatgacacaattggcgatcaga
attatcagcaagctcggtttcaccgttggaatagacgatgaagacataccaccagaagct
gctgagcaaatcgaggaggtcctcaaggaagctgagaacgaagttaacaggctgatagag
gcgtacagaagaggagatttagagccaatgcccggaagaagcatcgaggagacgcttgag
atgagaataatgcaggttctcggaagagcgagagacagggcgggtaaaattgcccagagg
cacctcggtatggacaacgcagccgttatcatggccgtaagcggtgcgagaggttcgatg
ctaaacctaacgcagatggctgcctgcatcggacagcagtccgtgagaggtgagaggata
agcaggggctacacctacaccaacagaacgctcagccacttcaagcccggagaccttgga
gcggaggcaagggggttcgtcagaagcagctacaagaaggggctctctccggtggagttc
ttcttccacgctgcaggtggaagagagggtcttgttgacaccgccgtcagaacatctcag
tcaggttacctccagaggagaatgattaacgctctgcaggacctgaaggtcgaatacgat
ggaacggtgagggagcagacctcgggagcattggtgcagttcagatacggtgaggacgga
gtcgatccgatgaggagcttcagaggaaaaccggttgatgttagaagaataatcagggaa
gtgatcggggaggtgaagaaatga
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