Archaeoglobus fulgidus DSM 4304: AF_2098
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Entry
AF_2098 CDS
T00011
Name
(GenBank) cell division control protein 48, AAA family (cdc48-2)
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
afu
Archaeoglobus fulgidus DSM 4304
Pathway
afu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
afu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
AF_2098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afu03019
]
AF_2098
03009 Ribosome biogenesis [BR:
afu03009
]
AF_2098
04131 Membrane trafficking [BR:
afu04131
]
AF_2098
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afu04147
]
AF_2098
Messenger RNA biogenesis [BR:
afu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AF_2098
Ribosome biogenesis [BR:
afu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
AF_2098
Membrane trafficking [BR:
afu04131
]
SNARE
SNARE associated proteins
Others
AF_2098
Autophagy
Aggrephagy
Other aggrephagy associated proteins
AF_2098
Exosome [BR:
afu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AF_2098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
CDC48_2
RuvB_N
AAA_5
TIP49
AAA_2
AAA_14
AAA_22
Vps4_C
nSTAND3
RNA_helicase
AAA_33
AAA_7
AAA_17
AAA_28
Mg_chelatase
Sigma54_activat
AAA_18
AAA_24
Parvo_NS1
NPHP3_N
IstB_IS21
ATPase
DUF815
SLFN-g3_helicase
ABC_tran
Zeta_toxin
AAA_3
AAA_19
AAA_30
Sigma54_activ_2
TsaE
bpMoxR
AAA_lid_PRS2_C
DUF5906
NB-ARC
SKI
CtsR_C
Zot
Motif
Other DBs
NCBI-ProteinID:
AAB89157
UniProt:
O28182
LinkDB
All DBs
Position
1887435..1889870
Genome browser
AA seq
811 aa
AA seq
DB search
MGDNMEITLKVNQAYPSDSGRGIARLDPDTMLKLQISPGDIIEIEGARKTVAKVWRAPKR
DWGKNIIRIDRFIRENAGVGVGDVVKVRKVEYQPAKTVILAPLKKMDLRIYGVDIGEYLK
HQFLKRPVVEGDLVPLVGSPALSGFGRYNQQNQAVVFVAVKTEPKGPVVIDETTKVVYRD
RPAKGFERFGKAGITYEDIGGLKEELQKVREVIELPLRYPELFQRLGIEPPKGVLLYGPP
GTGKTLIAKAVANEIGASFFTINGPEIMSKFYGESEQRLREIFEEAKENAPSIIFIDEID
SIAPKREEVTGEVERRVVAQLLTLMDGLEERGQVIVIGATNRIDAVDPALRRPGRFDREI
EIGVPDREGRYEIFQIHTRNMPLEAKYSREFVLDAIERFKRQVDDPELIKNLDFLYDEIK
NSETEEEVKGAVKNLLPQEVIDELEVEITKAMLRSLADQTHGFVGADIEALCKEAAMKAL
RRYLPQIDLNEDEIPIELLESIRVTWDDFMDALREIEPSAMREVFVEIPKVTWNDVGGLE
DVKREIIEAVEWPLKYPEKFKKFGIKPPKGVLLYGPPGTGKTLIAKAVANESEANFISIK
GGQILSKWLGESEKAVRKIFRKARQVAPCIIFFDEIDAIAQMRGIDEGSRAVERVLNQLL
TEMDGLEELHGVVVIGATNRPDILDPALLRPGRFDRMVYVRPPDKKSRLAIFKIHTRDMP
LSEDVDLEELADLTEGYVGADIEAICREAVMLAIRENINAEKVEMRHFLEALKKIKPSVN
EAMLNFYERFEEKMRTERMQVAATKPFMGYG
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataatatggaaatcacgctaaaggtaaatcaggcgtatccgagtgattcagga
agaggaatagcaagattggacccggacacaatgttaaagcttcaaatctcccccggagac
ataatagaaatagagggggccagaaagaccgttgcaaaggtctggagagctccgaagagg
gactgggggaagaacatcataaggattgacagattcataagggagaatgccggagttggt
gttggggatgtcgtcaaggttaggaaggttgagtaccagcccgcaaaaaccgtaatcctc
gcccccctcaagaagatggatttgaggatttacggagtcgatattggggagtatctcaag
caccagtttctgaaaagaccggttgttgaaggagatttagtccctctcgttggctctccg
gccctttcgggatttggaaggtacaaccagcagaaccaagctgtggttttcgttgcagtc
aagaccgagcccaagggccctgtggtcatcgacgagacaaccaaggtcgtttacagggac
agaccggcaaagggcttcgagaggttcggaaaggccggaatcacttacgaagacatagga
ggtttaaaagaggagcttcagaaggtaagagaggtcatagagctgcctttaaggtatccg
gagctcttccagaggctcggaatcgagccgccgaagggtgtgctgctctacggtccgccg
ggaactggaaaaacgttgattgccaaagctgtggcgaacgagatcggggccagcttcttc
accatcaacggtccggaaatcatgagcaagttctatggagaaagcgagcaaaggctgagg
gagatttttgaagaggcgaaggagaacgctccgtcgataatcttcatagacgaaatcgac
tcaatcgctcctaagagagaagaggtcaccggagaagttgagagaagagtcgtcgctcag
cttctgactctgatggacgggcttgaggagagagggcaggttatagtcatcggcgcaacg
aacagaattgacgctgtcgatccagcgttgagaaggccgggaaggttcgacagggagatt
gagatcggagtgccggacagagagggcagatacgagatattccagatacacacgaggaac
atgccactggaggctaagtacagcagagagttcgtcctcgatgcgattgagagattcaag
aggcaggttgacgaccctgagctgataaagaatctcgatttcctctacgacgagataaag
aactcagagacggaggaggaagtgaaaggagctgtgaaaaatctcctcccgcaggaagta
atcgacgagcttgaagttgagataactaaggcgatgctccgcagccttgctgatcaaacc
cacggatttgttggggcagacatagaggctctctgcaaggaggctgcaatgaaggctctt
aggaggtacctgccgcagattgacctcaacgaggacgagattccgatagagctgctcgaa
tcgatcagagtgacatgggacgacttcatggatgctctcagagaaattgagccctctgcg
atgagggaagttttcgttgagatacccaaggtcacctggaacgacgttggagggcttgag
gacgttaagagggagataattgaggctgtggagtggccgctgaagtaccctgagaagttc
aagaagttcggaattaagccgccgaaaggtgtgctgctctacggtccgccgggaactggt
aaaacgctgattgccaaagctgttgccaacgaaagtgaggcgaacttcataagcatcaag
ggagggcagattctaagcaagtggctcggagagagtgagaaggctgtgaggaagatattc
aggaaggcgaggcaggttgcaccctgtataatcttcttcgacgaaatcgatgcaatagcc
caaatgagaggcatagacgaaggaagtagagcagttgagagggtgctcaaccagcttctg
actgagatggacggtctcgaggagttgcacggagttgtagttattggcgcaaccaaccgc
ccggacattctcgaccccgcattgctcaggccgggcagattcgacagaatggtttacgtc
cgcccaccggacaaaaagagcagactggcaatattcaagattcacacgagggacatgccc
ctctccgaagacgttgacctcgaggagcttgctgatttgaccgaagggtacgttggagcg
gacatcgaggcgatttgcagagaggctgtgatgctggcaatcagggaaaacatcaacgcg
gagaaggtggagatgaggcacttccttgaggctctgaagaagataaagccgagcgtcaac
gaggccatgctgaacttctacgagagattcgaggagaaaatgaggaccgagagaatgcag
gttgcagcaacaaagcccttcatgggctacggttaa
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