Archaeoglobus fulgidus DSM 4304: AF_2117
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Entry
AF_2117 CDS
T00011
Name
(GenBank) 3-methyladenine DNA glycosylase (alkA)
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
afu
Archaeoglobus fulgidus DSM 4304
Pathway
afu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AF_2117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afu03400
]
AF_2117
Enzymes [BR:
afu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AF_2117
DNA repair and recombination proteins [BR:
afu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AF_2117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AfAlkA-like_TBP-like
HhH-GPD
HHH_5
AF1548-like_C
Motif
Other DBs
NCBI-ProteinID:
AAB89134
UniProt:
O28163
Structure
PDB
PDBj
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All DBs
Position
1906601..1907488
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AA seq
295 aa
AA seq
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MWRIELKHAVNWELKMKFFVLPELPTPDVVESGVWRRAIVLDGRAVAVMAYPESERTIVV
EGNFENREWEAVRRKLVEYLGLQNPEELYRFMDGDEKLRMLKNRFYGFGRAGLMSMSVFE
GIAKAIIQQQISFVVAEKLAAKIVGRFGDEVEWNGLKFYGFPTQEAILKAGVEGLRECGL
SRRKAELIVEIAKEENLEELKEWGEEEAYEYLTSFKGIGRWTAELVLSMALGKNVFPADD
LGVRRAVSRLYFNGEIQSAEKVREIARERFGRFARDILFYLFLYDRFFSKKTELV
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtggagaattgagctgaagcatgcggtaaactgggaactgaagatgaaattcttcgtt
ctgcctgagctgcctactccggatgttgttgaaagcggtgtgtggagaagagccatcgtg
ctggatggcagggcagttgcggtgatggcttatccggagagtgagagaacgattgtggtt
gaggggaattttgagaatagggagtgggaagcggtcaggcgtaagcttgtcgaatactta
ggcctgcagaatccggaggagctttacaggtttatggacggtgatgaaaagttaaggatg
ctaaaaaacaggttctacgggtttggcagggctggtttgatgtcgatgagcgtttttgag
ggcattgccaaggccatcatacagcagcaaatctctttcgtagttgcggagaaacttgct
gcaaaaattgttgggaggtttggtgatgaggttgaatggaatgggctgaaattttacggc
tttcccactcaggaggccattctgaaagctggggtagaggggctgagagagtgcgggctg
agcaggaggaaggcggagctgattgtggagattgccaaggaggagaatctggaggagttg
aaggagtggggtgaagaggaggcatacgagtatctcacttccttcaagggcataggcagg
tggacagctgagcttgttctgtcaatggccctcggcaagaacgtttttccagcagatgat
cttggcgtgaggagggcggtttcaaggctttacttcaatggggagattcagagtgcggaa
aaagtgagggagattgcgagggagaggtttggcaggtttgcgagggacatactgttctac
ctctttctctacgacagattttttagtaaaaagacagaattagtttga
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