Archaeoglobus fulgidus DSM 4304: AF_2254
Help
Entry
AF_2254 CDS
T00011
Name
(GenBank) ATP-dependent RNA helicase, DEAD-family (deaD)
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
afu
Archaeoglobus fulgidus DSM 4304
Pathway
afu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AF_2254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afu03019
]
AF_2254
03009 Ribosome biogenesis [BR:
afu03009
]
AF_2254
Enzymes [BR:
afu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AF_2254
Messenger RNA biogenesis [BR:
afu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AF_2254
Ribosome biogenesis [BR:
afu03009
]
Prokaryotic type
rRNA helicases
AF_2254
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
P-loop_SecA
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AAB89003
UniProt:
O28030
LinkDB
All DBs
Position
2018468..2019574
Genome browser
AA seq
368 aa
AA seq
DB search
MKEVNKVEFEDLGISENGLNAVRRKGFEKPTEIQREIIPRFFEGEKDMVGQAQTGSGKTA
AFALPILDLVDERSKDVQAIVITPTRELALQVKDEIESLRGGKKVHVLAVYGGQPIFPQI
ERLRKGVQIVVGTPGRVIDHLERRTLSLEKVRFFVLDEADRMLDMGFIDDIERILRHAGA
ERRVLMFSATMPPEVLRLARRYMRDYEVVRVHSKITPENVEHRCLKVNPEKRFEHLCRIL
DENNFYGIVFCQTKKETRELGRRLRARGYKADALNGDIPQHKRESILRNFRKGYTRVLVA
TDVAARGIDVKDLTHVVNYSIPQDPEAYIHRTGRTGREGKRGKAITFVAPWESRKLKIIE
RTAKVRFR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaggtgaataaagtggaatttgaagatttgggaatctcagaaaacggtttgaat
gcagttagaagaaagggttttgagaagcctacggaaattcagagggaaatcataccgagg
tttttcgaaggtgaaaaggatatggtcggccaggcacagacgggctcggggaaaacagct
gcctttgccctgccaattctcgaccttgtggatgaaagaagcaaggatgtgcaggccata
gtaataacgcccacaagggagctggctttgcaggtaaaggacgagattgagtcgctcaga
gggggcaaaaaggttcacgtcctcgctgtttacggcgggcagcccatattccctcaaatt
gagaggctgaggaagggcgtgcagatagtcgtgggcacaccgggaagagttatcgaccac
cttgagaggagaacgctttcgctcgaaaaagttcggttcttcgtgcttgacgaggcggac
aggatgctcgacatgggcttcattgacgacattgagaggatcctcagacacgcaggcgcg
gaaaggcgtgttctgatgttctccgcaaccatgccccctgaagttttgaggctggcgagg
cgttacatgagagattacgaggttgtgagagttcacagcaaaatcactcccgaaaacgtc
gagcacagatgtctgaaggttaacccggaaaagaggttcgagcatctctgcagaattctc
gacgagaacaacttttacggcatcgttttctgccagacgaaaaaagagacaagagaactt
ggaagaaggcttagagcgaggggatataaggcagatgcgctgaacggagacattccacag
cataaaagagagagcatccttagaaatttcagaaaaggatacaccagagttcttgtcgca
acagatgttgccgcaaggggaattgacgtgaaagacctcacccacgtcgtcaactactct
atcccgcaggatccagaagcatatatccacagaaccggaagaaccggcagagagggaaag
aggggtaaggccataaccttcgttgctccctgggagtcgaggaagctgaaaataatagag
aggactgcgaaggtccggtttaggtaa
DBGET
integrated database retrieval system
