Aythya fuligula (tufted duck): 116485474
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Entry
116485474 CDS
T07966
Symbol
ITGB1
Name
(RefSeq) integrin beta-1 isoform X1
KO
K05719
integrin beta 1
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03271
Virion - Rotavirus
aful04145
Phagosome
aful04510
Focal adhesion
aful04512
ECM-receptor interaction
aful04514
Cell adhesion molecules
aful04530
Tight junction
aful04810
Regulation of actin cytoskeleton
aful04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
116485474 (ITGB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116485474 (ITGB1)
04514 Cell adhesion molecules
116485474 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116485474 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
116485474 (ITGB1)
04530 Tight junction
116485474 (ITGB1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116485474 (ITGB1)
04810 Regulation of actin cytoskeleton
116485474 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aful04131
]
116485474 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aful04147
]
116485474 (ITGB1)
04515 Cell adhesion molecules [BR:
aful04515
]
116485474 (ITGB1)
04090 CD molecules [BR:
aful04090
]
116485474 (ITGB1)
Membrane trafficking [BR:
aful04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
116485474 (ITGB1)
Exosome [BR:
aful04147
]
Exosomal proteins
Proteins found in most exosomes
116485474 (ITGB1)
Cell adhesion molecules [BR:
aful04515
]
Integrins
Integrin beta subunits
116485474 (ITGB1)
CD molecules [BR:
aful04090
]
Proteins
116485474 (ITGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
116485474
NCBI-ProteinID:
XP_032036735
UniProt:
A0A6J3CE86
LinkDB
All DBs
Position
2:15473431..15516803
Genome browser
AA seq
823 aa
AA seq
DB search
MQLYFCLLVTINHKICLSGFVFQINLKFLTWAGILCCLIWSGFAQQAGSDCIKANAKSCG
ECIQAGPNCGWCKKTDFLQEGEPTSARCDDLAALRSKGCPMEDIENPRGSKQVLEDREVT
NRKIGAAEKLKPEAITQIQPQKLVLKLRVGEPQTFSLKFKRAEDYPIDLYYLMDLSYSMK
DDLENVKSLGTALMQEMQKITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTGDQNCTSP
FSYKNVLSLTSEGNRFNELVGKQHISGNLDSPEGGFDAIMQVAVCGDQIGWRNVTRLLVF
STDAGFHFAGDGKLGGIVLPNDGKCHLENNVYTMSHYYDYPSIAHLVQKLSENNIQTIFA
VTEEFQAVYKELKNLIPKSAVGTLSSNSSNVIQLIIDAYNSLSSEVILENSKLPKGVAIS
YKSYCKNGVNDTQEDGRKCSNISIGDEVRFEINVTAYECPKKGQNETIKIKPLGFTEEVE
INLQFICECQCQSEGEPNSPACHEGNGTFECGACRCNEGRIGRLCECSTDEVNSEDMDAY
CRRENSTEICSNNGECICGQCVCKKRENTNEVYSGKYCECDNFNCDRSNGLICGGNGICK
CRVCECFPNFTGSACDCSLDTTPCMASNGQICNGRGTCECGTCNCTDPKFQGPTCEMCQT
CLGVCAEHKDCVQCRAFNKGEKKETCSQECMHFNMTRVESRDKLPQPGQPDPLSHCKEKD
VDDCWFYFTYSVNSNGEANVHVVETPECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLM
IIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEGK
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgcaactttatttttgtttactggtcacaataaatcataaaatctgtttgtctggtttt
gtatttcagattaatttaaaatttctcacgtgggctggcatcctctgttgcttgatatgg
agcggatttgctcagcaagctggaagtgactgcataaaagctaatgcaaaatcatgtggt
gaatgtatacaagcaggaccgaactgtggttggtgtaaaaaaacagacttcttgcaagaa
ggagaaccaacgtctgcccgatgtgatgacttggcagcactgagaagtaaaggctgtcct
atggaagatatagaaaatcctagaggtagcaaacaggtgcttgaagatagagaagtaaca
aaccgtaaaataggtgctgcagagaaactgaaaccagaggccattacacagatccagcca
caaaaattagtactgaaactaagagtcggggaaccgcaaacattttcattaaaatttaag
agagctgaagattaccccattgacctttactatcttatggacctctcctattctatgaaa
gatgacttagagaatgtgaaaagtctcggaacagctctgatgcaagaaatgcaaaaaata
acttcagactttcgaattgggtttggctcttttgtggagaaaactgtgatgccatatata
agtacaacaccagccaaactcagaaatccttgtacaggtgaccagaactgtacaagtcca
tttagctataaaaatgtgctcagtcttaccagtgaaggaaatcgatttaatgaacttgta
ggtaaacagcacatttctggtaatttggattctcctgaaggtggatttgatgcaataatg
caggttgcagtttgtggggatcaaattggatggagaaatgttacaagactattagtgttt
tccacggatgctggatttcacttcgcaggagacggtaaacttggtggaattgttttacca
aatgatgggaaatgtcacctggaaaataatgtgtacacaatgagccactattatgattat
ccctcaattgctcatctggtacagaagcttagtgagaacaatattcagacaatttttgct
gttactgaagagtttcaggcagtttataaggaactgaaaaatctgataccaaaatcagca
gtgggaacgttgtcttcaaactccagcaatgtgattcagctgatcattgatgcatacaat
tccctttcttcagaggtgatcctggaaaacagtaagctaccaaaaggagtggcaatcagt
tacaagtcttactgcaagaatggagtgaatgacacacaagaagatggaaggaaatgttct
aacatttcaataggagatgaggttagatttgagattaatgtaacagcttacgaatgtcca
aagaaaggacaaaatgaaacaattaaaattaaaccattgggattcactgaagaagtggaa
attaatctccagttcatctgcgaatgtcagtgtcaaagcgaaggagaacctaatagtcca
gcctgccacgaagggaatggaacatttgaatgtggtgcatgcagatgtaatgaaggacgt
attggaagactttgtgaatgtagtacagatgaagtaaatagtgaggatatggatgcttac
tgcaggagggagaacagtacagaaatatgtagtaacaatggagaatgcatttgtggacaa
tgtgtatgcaagaaaagagaaaacaccaacgaagtgtattctggcaaatattgtgaatgt
gataacttcaactgtgatcgatcaaatggtctgatttgtggaggaaatggtatctgcaaa
tgcagagtttgtgagtgtttccccaacttcactggcagtgcttgtgattgctccctggat
actactccatgtatggcatctaacgggcagatttgcaatggaagaggaacctgcgaatgc
ggaacttgtaattgtacagatcccaaattccaaggccccacatgtgaaatgtgtcagact
tgccttggcgtctgtgcagagcacaaggactgtgttcagtgcagagctttcaataagggt
gaaaagaaggaaacatgttctcaggaatgtatgcattttaacatgacacgggtagaaagt
cgagacaaattgccgcaaccaggccagcccgatccactgtcgcattgcaaagagaaggac
gtcgatgactgctggttctacttcacgtactccgtcaactcaaatggtgaagccaatgtc
catgtggtagagactccagaatgccctagtggccctgacatcattcccattgtagctggt
gtggttgctggaattgttcttattggacttgcattgttattgatttggaaactactaatg
atcattcatgacagaagagaatttgctaaatttgaaaaggagaagatgaatgccaagtgg
gatacgggtgaaaatcctatttacaagagtgcagtgacaactgtggtcaatcctaaatat
gagggaaaatga
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integrated database retrieval system