KEGG   Aythya fuligula (tufted duck): 116485474
Entry
116485474         CDS       T07966                                 
Symbol
ITGB1
Name
(RefSeq) integrin beta-1 isoform X1
  KO
K05719  integrin beta 1
Organism
aful  Aythya fuligula (tufted duck)
Pathway
aful03271  Virion - Rotavirus
aful04145  Phagosome
aful04510  Focal adhesion
aful04512  ECM-receptor interaction
aful04514  Cell adhesion molecules
aful04530  Tight junction
aful04810  Regulation of actin cytoskeleton
aful04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:aful00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    116485474 (ITGB1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116485474 (ITGB1)
   04514 Cell adhesion molecules
    116485474 (ITGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116485474 (ITGB1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116485474 (ITGB1)
   04530 Tight junction
    116485474 (ITGB1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116485474 (ITGB1)
   04810 Regulation of actin cytoskeleton
    116485474 (ITGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aful04131]
    116485474 (ITGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aful04147]
    116485474 (ITGB1)
   04515 Cell adhesion molecules [BR:aful04515]
    116485474 (ITGB1)
   04090 CD molecules [BR:aful04090]
    116485474 (ITGB1)
Membrane trafficking [BR:aful04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    116485474 (ITGB1)
Exosome [BR:aful04147]
 Exosomal proteins
  Proteins found in most exosomes
   116485474 (ITGB1)
Cell adhesion molecules [BR:aful04515]
 Integrins
  Integrin beta subunits
   116485474 (ITGB1)
CD molecules [BR:aful04090]
 Proteins
  116485474 (ITGB1)
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail PSI_integrin I-EGF_1 EGF_2
Other DBs
NCBI-GeneID: 116485474
NCBI-ProteinID: XP_032036735
UniProt: A0A6J3CE86
LinkDB
Position
2:15473431..15516803
AA seq 823 aa
MQLYFCLLVTINHKICLSGFVFQINLKFLTWAGILCCLIWSGFAQQAGSDCIKANAKSCG
ECIQAGPNCGWCKKTDFLQEGEPTSARCDDLAALRSKGCPMEDIENPRGSKQVLEDREVT
NRKIGAAEKLKPEAITQIQPQKLVLKLRVGEPQTFSLKFKRAEDYPIDLYYLMDLSYSMK
DDLENVKSLGTALMQEMQKITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTGDQNCTSP
FSYKNVLSLTSEGNRFNELVGKQHISGNLDSPEGGFDAIMQVAVCGDQIGWRNVTRLLVF
STDAGFHFAGDGKLGGIVLPNDGKCHLENNVYTMSHYYDYPSIAHLVQKLSENNIQTIFA
VTEEFQAVYKELKNLIPKSAVGTLSSNSSNVIQLIIDAYNSLSSEVILENSKLPKGVAIS
YKSYCKNGVNDTQEDGRKCSNISIGDEVRFEINVTAYECPKKGQNETIKIKPLGFTEEVE
INLQFICECQCQSEGEPNSPACHEGNGTFECGACRCNEGRIGRLCECSTDEVNSEDMDAY
CRRENSTEICSNNGECICGQCVCKKRENTNEVYSGKYCECDNFNCDRSNGLICGGNGICK
CRVCECFPNFTGSACDCSLDTTPCMASNGQICNGRGTCECGTCNCTDPKFQGPTCEMCQT
CLGVCAEHKDCVQCRAFNKGEKKETCSQECMHFNMTRVESRDKLPQPGQPDPLSHCKEKD
VDDCWFYFTYSVNSNGEANVHVVETPECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLM
IIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEGK
NT seq 2472 nt   +upstreamnt  +downstreamnt
atgcaactttatttttgtttactggtcacaataaatcataaaatctgtttgtctggtttt
gtatttcagattaatttaaaatttctcacgtgggctggcatcctctgttgcttgatatgg
agcggatttgctcagcaagctggaagtgactgcataaaagctaatgcaaaatcatgtggt
gaatgtatacaagcaggaccgaactgtggttggtgtaaaaaaacagacttcttgcaagaa
ggagaaccaacgtctgcccgatgtgatgacttggcagcactgagaagtaaaggctgtcct
atggaagatatagaaaatcctagaggtagcaaacaggtgcttgaagatagagaagtaaca
aaccgtaaaataggtgctgcagagaaactgaaaccagaggccattacacagatccagcca
caaaaattagtactgaaactaagagtcggggaaccgcaaacattttcattaaaatttaag
agagctgaagattaccccattgacctttactatcttatggacctctcctattctatgaaa
gatgacttagagaatgtgaaaagtctcggaacagctctgatgcaagaaatgcaaaaaata
acttcagactttcgaattgggtttggctcttttgtggagaaaactgtgatgccatatata
agtacaacaccagccaaactcagaaatccttgtacaggtgaccagaactgtacaagtcca
tttagctataaaaatgtgctcagtcttaccagtgaaggaaatcgatttaatgaacttgta
ggtaaacagcacatttctggtaatttggattctcctgaaggtggatttgatgcaataatg
caggttgcagtttgtggggatcaaattggatggagaaatgttacaagactattagtgttt
tccacggatgctggatttcacttcgcaggagacggtaaacttggtggaattgttttacca
aatgatgggaaatgtcacctggaaaataatgtgtacacaatgagccactattatgattat
ccctcaattgctcatctggtacagaagcttagtgagaacaatattcagacaatttttgct
gttactgaagagtttcaggcagtttataaggaactgaaaaatctgataccaaaatcagca
gtgggaacgttgtcttcaaactccagcaatgtgattcagctgatcattgatgcatacaat
tccctttcttcagaggtgatcctggaaaacagtaagctaccaaaaggagtggcaatcagt
tacaagtcttactgcaagaatggagtgaatgacacacaagaagatggaaggaaatgttct
aacatttcaataggagatgaggttagatttgagattaatgtaacagcttacgaatgtcca
aagaaaggacaaaatgaaacaattaaaattaaaccattgggattcactgaagaagtggaa
attaatctccagttcatctgcgaatgtcagtgtcaaagcgaaggagaacctaatagtcca
gcctgccacgaagggaatggaacatttgaatgtggtgcatgcagatgtaatgaaggacgt
attggaagactttgtgaatgtagtacagatgaagtaaatagtgaggatatggatgcttac
tgcaggagggagaacagtacagaaatatgtagtaacaatggagaatgcatttgtggacaa
tgtgtatgcaagaaaagagaaaacaccaacgaagtgtattctggcaaatattgtgaatgt
gataacttcaactgtgatcgatcaaatggtctgatttgtggaggaaatggtatctgcaaa
tgcagagtttgtgagtgtttccccaacttcactggcagtgcttgtgattgctccctggat
actactccatgtatggcatctaacgggcagatttgcaatggaagaggaacctgcgaatgc
ggaacttgtaattgtacagatcccaaattccaaggccccacatgtgaaatgtgtcagact
tgccttggcgtctgtgcagagcacaaggactgtgttcagtgcagagctttcaataagggt
gaaaagaaggaaacatgttctcaggaatgtatgcattttaacatgacacgggtagaaagt
cgagacaaattgccgcaaccaggccagcccgatccactgtcgcattgcaaagagaaggac
gtcgatgactgctggttctacttcacgtactccgtcaactcaaatggtgaagccaatgtc
catgtggtagagactccagaatgccctagtggccctgacatcattcccattgtagctggt
gtggttgctggaattgttcttattggacttgcattgttattgatttggaaactactaatg
atcattcatgacagaagagaatttgctaaatttgaaaaggagaagatgaatgccaagtgg
gatacgggtgaaaatcctatttacaagagtgcagtgacaactgtggtcaatcctaaatat
gagggaaaatga

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