Aythya fuligula (tufted duck): 116485509
Help
Entry
116485509 CDS
T07966
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aful04131
]
116485509 (VPS50)
Membrane trafficking [BR:
aful04131
]
Protein recycling
Others
EARP complex
116485509 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
116485509
NCBI-ProteinID:
XP_032036829
UniProt:
A0A6J3CFH6
LinkDB
All DBs
Position
2:25150980..25226321
Genome browser
AA seq
967 aa
AA seq
DB search
MQKIKSLMARQGLRSPQESVHDLSPIENLRIPSKEELRESREEPTDPQAQQEIINSIEEV
YFSSDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQTGLQLAAVICANGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDETATVSSV
SDGSNVIGTEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTAVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPMKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVVRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPAGTLTAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMTNVKWDVKEIMSQHNVYVDALLKEFEEFNRRLNEVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMERWIKEHREYSTKHLTNLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatggcccggcagggtctaagaagtcctcaggagagtgtc
catgacctcagtcctattgaaaacttacggattcctagtaaggaggagctcagagaatca
cgggaagaaccaactgatcctcaagctcagcaagaaataattaatagtattgaagaagtt
tatttttccagtgattcctttgatattgtgaagtatgaattagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagacaaattaaaacaacagcaagctgctgta
tctaagaaagttgcagacttgattcttgaaaagcagcctgcatacgttgaggaacttgag
cgtgttacatcattacagactggtcttcaattagcggctgttatttgcgcaaatggaaga
agacacctgaatatagcaaaggagggattcacacaaactagtttgggacttcttgcaaat
caaaggaaacgacagttgcttattggactgctgaagtctctgagaacaataaaaacactg
caaagaactgatgtacgcttaagtgagatgctagaggaagaggactatccaggagctatt
cagctgtgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagt
gagttaaattcaaaactgcaagatactttggagcaaatagaggagcaattggatgtagcg
ctctccaagatatgcaagaacttcgatataagtcattacacaaaggttcagcaagcttac
aggctgcttggaaaaacacagacagcaatggaccaattacatatgcacttcactcaagcc
attcacaacactgtgtttcaagtagttcttggatatgtggagctgtgtgcaggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgtacgcatattacatcagacagc
tacattccatgccttgctgatctctgtaaagccctctgggaagtcatgctcagctattac
cgaacaatgcagtggcatgagaatcatgatcaagatgagacagcaactgtatcttctgtt
tcagatggcagcaatgtgattggaactgaggagaacagttttgaccgcagctatgtaaaa
aagaaattggaacatgggctttcacgaatatggcaggatgttcaactgaaagtgaaaacg
tatcttctgggaacggatctgtcaaacttcaaatatgatgacttcatatttgtacttgat
gtaatcagcaggctgatgcaagttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagtgttaactatttcaaaacataccacagaacacgtctt
gaagaattaagaatgtttttggagaacgagacctgggaactttgccctgttaaatccagc
tttagtattttgcagcttcatgaatttaagttcatggagcagtcacgttccccatctgtg
tcacctagtaagcagcctgcttcagcaatttcaacagcagtaactttatttgagcagtac
tgtaatggaggaaacccatttgaaatccaggctgacagcaaagatgatgagacagaagat
gtgttagcttccaatgggtatgaatcggatgaacaagaaaaaagtgcgtatcaagaatat
gatagtgacagtgatgttcctgaagagttgaaaagagactacgtagatgagcagacagga
gatgcccctatgaaaagtgtttctcgagaaactctgaggagcagaaagagatcggattat
aacctcaataaagtgaatgcacctatcctaacaaacactacactgaatgtagtaaggctt
gttggtaaatatatgcagatgatgaatattctcaaaccaattgcgtttgatgtgatccac
ttcatgtctcagctcttcgactactatctgtatgcagtctatacgttttttggccgaaat
gacacgtttgaatcaacaggattgggcctcagtagcagcagattacgcacgacactgaac
agaatccaagagagcctcattgatctggaggtctctgctgatcctgcaggaactctcaca
gctgctgaagagagaaaggagaaggtgccaagcccacatctcagtcatctagtagttctg
acgtctggcaactcgctgtatggtttggcagagagagtggtagccacggaatccttggta
tttttggctgagcagtttgagtttcttcaacctcatcttgatgccgtgatgccagctgcc
aagaagccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgc
aaaccggtttattggattgttgctgctaaagccattgattatgaacagatgctgcttctc
atgactaatgtaaaatgggatgtgaaggaaatcatgtcacaacacaatgtatacgtagat
gctcttttaaaggaatttgaagaatttaacagaaggttgaatgaagtatctaagagagtc
cgtattccactgccagtctcaaatatcctttgggagcactgcattcgcttagctaataga
actcttgtggaaggttatgctaatgtaaagaaatgcagcaatgaaggacgtgccttgatg
caactggactttcaacagtttttaatgaaactagaaaagttaacagacattaggcccatt
ccagataaagaatttgtggagacctacattaaagcatactacttaacagaaaatgacatg
gagcgctggataaaggagcacagggaatattccactaagcacttgacaaatctggtgaat
gtttgtctgggatcccacatcaacaagaaggcaagacagaagctgctggctgctattgat
gacatagacaggcctaaaagataa
DBGET
integrated database retrieval system
