Aythya fuligula (tufted duck): 116485522
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Entry
116485522 CDS
T07966
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04510
Focal adhesion
aful04512
ECM-receptor interaction
aful04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116485522 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116485522 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116485522 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
Poxvirus_B22R_C
Hepar_II_III
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
116485522
NCBI-ProteinID:
XP_032036850
UniProt:
A0A6J3CEK1
LinkDB
All DBs
Position
2:107209027..107314865
Genome browser
AA seq
3098 aa
AA seq
DB search
MMRMMVGSSGWRLLLALASLLWAPGHGQPRGLFPAILNLASNAHISTNATCGEKGPEMFC
KLVEHVPGRPLRNAQCRVCDRHSANPKEQHPISSAIDGTNNWWQSPSIQNGRQYHWVTIT
LDLRQVFQVAYVIIKSANAPRPGNWILERSIDGTEFRPWQYYAISDTECLTRYNITPRIG
PPTYKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSEKLLEFTSARYIRLRLQR
IRTLNADLMTLSHHDPKELDPIVTRRYYYSIKDISVGGMCICYGHARSCPLDEITKKLQC
QCEHNTCGESCNKCCPGYHQKPWRPGTISAGNKCEKCNCHNKAEDCYYNQSIADQKRSMD
IHGQYIGGGVCLNCTQHTTGINCETCADGYFRPHKVSPYDDHPCYPCGCDPFGSLSSDCV
KDEHHADSQHEMWPGQCQCREGYTGEKCDRCAFGYRGYPNCLRCNCSLIGSINEDPCTEP
CICKENVEGENCDLCKPGFYNLQERNPQGCTECFCFGVSDVCDSLTWPINQISHMTGWLV
TDLYNTRGVQPQRSQLDGPHQISINNSEAVKVLKNTYYWLAPEPYLGNKLTAFGGDLKYT
VSYDIPMESVDSDIVSSVDVIIQGNGQILSTRAAGLSLQPYEEYSNSVRFVSENFIDFNT
KKAIDRERLMTVLVNVTHLLIRASYNIAKRAVYRLDSVTLDTASANVIDLSSAPDVEFCE
CPQGYTGISCESCLPGYYRVDGILFGGICQPCKCNGHATECDIQGVCFACQHNTTGPFCD
RCLPGFYGNPSQGTPEDCQPCACPLSSAANNFSPTCQLREGGGIVCDKCLPGHTGFQCER
CANGYYGNPLVPGQSCAPCECNGNVDPQEDGHCDTVTGQCLKCVGNTAGDHCEKCADGYY
GDAVAEKSCRACECHVNGSLSSTCHHETGICHCKSNVIGQRCDKCLNGYYGLLTGLGCIP
CNCSQFGSVSEVCNHQGQCHCLPGVAGEKCDHCAHGFHSFQNGGCTPCDCAHTQNNCNAD
SGQCICPPHTWGPKCEFCEENHWGLSPKLGCKACNCSDTGSINLQCDVLTGQCQCKAEFG
GQDCSRCALGYRDYPDCVACDCDLSGTTAEMCDDTEGLCGCEEETGICTCKENVFGLQCS
ECKPGTFALSANNSLGCTPCFCFGLSSFCWEVEDHVRIPITLTPDQSILHVVAPSNLTGT
VEGVFSQFSDILLDATIVRKYLNTETFYWRLPEQFQGDQLMAYGGKLRYTVAFYALDGFG
TSNFEPQILMKGGRTSKLVIYVDIPSPENGVRSDKEVEMKEDSWKYFNSVSEKPVSRSDF
MSVLSNIEYILIKAAYGQGLQQSRIANISMEIAVKFEEMHRGRSRAHLIEQCRCPAGYTG
FSCQSCAPGYYREKPTELGVRESHTMIARCLPCQCNNHSETCDPETGKCLNCRDNTVGDY
CSACAPGYYGKVIGSVNDCSLCACPRANPVSFSPTCVLKGVQDYHCDACLPGYEGQYCEK
CSLGYYGDPQLPGGSCHPCRCNPSGSVHVNCDRATGKCLCKQGVTGQLCEECEARHLLVE
GECVSCDDNCTGVLLSNLDNLNQAILSVNLTGIAHVPYGVLSEMENATKHLKGSVISRED
PTYSLATAEESLLSLSGGFAQLPEESSRILKKAWQLNTMTQETRNKSKELIGFIDTVHTA
IKVLAEVAVSLNETLDLPLPNATSQSLQDDISAQLDALRKKDFGQQHYNATSLLKAAENL
LLLVQKEYHRPQQELAELKKNASQLLSKHSSRLQDAQDLVKEALANINETNRLFPLISSN
LGELNEKKLNIKEGKEASTMLIKEGRILVNVAASVVQDVKNSTSNLEVHQDGLVLWSTNL
RHHVDELVMQMSVRGVLNLVYRAEDHAAQFQRLADALESGLSKIRNVTLNATAAVYTHSN
VKSVIERTESLADDASRVVNGPLDLPEESLSLLGKEALLLSSKFQNEAKNLKKRSNGLVF
ELNGLNKKVEKLHESAIKIVNQLNDSLMTLKALPNGTRKYVLEVKELAVSANTSTVVGLS
HFGDFNQKLLNTSSTLSRVNDTLRKTSELITDSSKVAITAEKQVKEVKAQASLLLNKLKP
LKILEENLSRNLSEIKELISQARKQAASIKVAVSADRDCIRAYQPQISSTNYNTLTLNVK
TAEPDNLLFYLGSNGKTDFLAVEMRRGKVALLWDLGSGSTRVEYPDLQIDNNKWHRIHAT
RFGKTGTLSIEEMNSNQKSSSKSATSPGIASILDVNKSTLMFIGGLGGQIKKSPAVKVTH
FKGCMGEASLNGKSIGLWNYMEREGTCNGCFGSPQDEDTSFHFDGSGYSVVEKALRSTVT
QIIIFFSTFSPNGLLLYLTSNGTRDFLSLELVDGKVRLTVDLGSGPLALTTENRYNNGTW
YKISFSRNKKQGMLAVMDAYNLNYKETKQGESPGVASDLNRSDKDPIFIGGLPRSRAVRK
GLNSRTYVGCIKNLEISRSTFDLLRNSYGVRKGCVLEPIRTVNILNNGYIELEPKSLSPE
SELMATFATKNSNGIILAGLSRRMEKRQRRQAHLPFFSIMLVDGHLAVHINAGDRTSTRK
VILQSANGTYSDGQEHSLILIRNKRIITVQVDESSPSELRLGSSTEMSPMNISNFYAGGI
PAGESFLGLKLTGSFRGCISNLIFNKELLDFTTSMKYEYVDMDSCFLSEKPKPAIQLEDF
DIQPELQALPAPMRPLTDSKKVVCAKDELPDHVQGAHQFGLAKGSHLTLLFNQSTVRKKL
SVQLNLRTFASSGLIYYMAHQNQVDYAALQLHGGQLYFSFDLGRGKAVAFHPAVVNDGKW
HTIKTEYAKRKGIIIVDGHELVAVSALGDGSTLDVEGKLYVGGLPLDYVAKNLGNVTHSI
PACIGSMTINSKQLDKESPVSIFAVNKCYVTVQEGTFFDGSGFAALYREGYKVRSDVNIT
LEFRTTGLNGVLLGVSSAKVDAIGLEIVNGKVLFHVNNGAGRITAAYEPGVTNSLCDGKW
HKLQANKSKHRISLIIDGNLVQTDNPYIQSTSADTNNPIYVGGYPGDVKQNCLTSKSSFH
GCLRNLVLNKGQQAELFDFSKAFDLRGVFPHSCPGDEH
NT seq
9297 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggatgatggtgggcagcagcgggtggcggctgctgctggctctggcctcgctc
ctctgggcgccggggcacggccagccccgaggcctgttccctgccattttgaacctggcc
agcaatgctcacatctccaccaatgccacttgtggggaaaaaggaccagagatgttctgc
aaacttgttgagcatgtcccaggccgaccactgcgcaacgcccagtgccgggtctgtgac
cgtcacagtgccaatcccaaagagcagcacccaatttctagtgcaattgatggtaccaat
aattggtggcaaagtcccagcattcagaatgggaggcagtaccactgggtcaccatcacc
ttggatctaaggcaggtctttcaagttgcatatgtcatcatcaaatctgctaatgctcca
cgacctggaaactggattttggaacgctccatagatggcacagagttcagaccatggcag
tactatgcaattagcgacacagaatgtttaactcgttataatatcacaccaagaattggg
ccaccaacgtacaagagagatgatgaagtgatctgcacctcctattactccagactcgtt
cccctggaacatggagagattcacacatcactgatcaacggtaggcctagtgctgatgat
ccttcggaaaagcttttggaatttacttctgcacgatacattcgcttacgactgcagcgc
attagaacccttaatgctgacctcatgactctcagccatcatgatcctaaagaactagac
cccattgttaccagaaggtactactactcaataaaggacatctctgttggtggcatgtgt
atttgttatggccacgctcgaagctgtcccctggatgaaatcacaaagaaattgcagtgc
cagtgtgagcacaacacatgtggagagagctgtaacaaatgctgtcctgggtatcatcag
aaaccatggagaccaggaaccatttctgctgggaacaaatgtgagaagtgcaactgtcat
aacaaagcagaagattgttattacaatcagagtattgcagatcagaaaaggagcatggat
attcacggccagtatataggaggtggtgtctgtttaaactgtactcaacacactactggt
atcaactgtgaaacgtgtgctgatggatactttagaccacacaaagtttctccctatgat
gatcacccctgctatccctgtggctgtgacccatttggatctttgagttctgactgtgtt
aaagatgagcaccatgctgactcacagcatgagatgtggccaggtcaatgtcaatgcaga
gaaggttacacaggagaaaaatgcgaccgttgtgcatttgggtatcgaggctatccaaac
tgccttcgttgtaactgcagcctaattggcagcattaacgaagatccatgcacagaacct
tgtatttgcaaagaaaatgtagaaggtgagaactgtgacctctgtaaacctggattctac
aacctgcaagaaagaaatcctcagggctgcacagagtgtttctgctttggagtttctgat
gtctgtgatagcctaacatggcccatcaatcagatatcacacatgactggatggcttgtt
actgatctgtataacacaaggggtgtgcaacctcagcgaagccaattggatggaccccac
caaataagcatcaacaactctgaggctgtgaaagtgctgaaaaatacttactactggtta
gcgcctgagccatatttaggcaataaactcacggcttttggtggagacttgaagtataca
gtgtcttatgacattccaatggagagtgtggacagtgatatagtatctagcgtggatgtc
atcattcagggcaatgggcagattttgagcacaagagcagcaggcttgtcattgcagccg
tatgaggagtactctaattcagtgagattcgtgtcggagaattttatagacttcaataca
aaaaaagctatagaccgagaaagactgatgactgttctagtaaatgtgactcatcttctc
attagggccagctacaacattgccaaaagagctgtatacaggctggactctgtaaccctg
gatactgcaagtgcgaatgttatagatctttcttcagcaccagatgtggaattctgtgaa
tgtcctcaaggttacacaggaatatcctgtgagtcctgtctccctgggtactaccgtgtg
gatggaatattattcgggggtatttgtcaaccctgcaaatgcaatgggcatgcaactgaa
tgtgatattcaaggtgtttgctttgcttgccaacacaacacgacaggacctttttgtgat
cggtgcttgcctggcttctatggaaatccatcccaaggaactcctgaggactgccagccc
tgtgcctgtcctctgagctctgctgcaaataatttcagtcctacttgccagctgagggaa
ggaggtggaattgtctgtgacaaatgtctcccaggccacactggtttccagtgtgaaagg
tgtgctaacgggtactatggaaatccacttgtgcctgggcagtcgtgtgctccttgtgaa
tgcaatggcaatgtagaccctcaagaagatggtcactgtgatactgtcacaggacagtgc
ttgaaatgtgtggggaacacagcaggtgaccactgtgagaagtgcgctgatgggtattat
ggggatgcagtggctgagaaaagttgtcgtgcctgtgagtgccacgtgaatggttctctt
tccagtacttgtcatcatgagacaggcatctgtcactgcaagtcaaacgtgattggacaa
agatgtgataagtgcctgaatggctattatggattgcttactggacttggctgtattccc
tgcaactgcagtcaatttggctcagtctccgaggtctgcaaccatcaggggcagtgtcac
tgtttaccaggcgtggctggagaaaagtgtgatcactgtgctcatggctttcattcgttc
cagaatgggggctgtacaccctgtgactgtgctcatactcagaacaactgtaacgcagat
tctggtcagtgcatttgtccccctcacacttggggaccaaaatgtgaattctgtgaagaa
aatcactggggactctctcctaaactcggctgcaaggcttgcaactgtagtgacactggc
tcaatcaatctccagtgtgatgtattgactggtcaatgccagtgcaaagctgaatttgga
ggacaagactgttccagatgtgcattaggctacagggactacccagactgtgttgcctgt
gactgcgacttaagtggaacgacagcagagatgtgtgatgatactgaaggactttgtggg
tgtgaagaagaaactggcatctgtacctgcaaggaaaatgtatttgggctgcagtgcagt
gagtgtaaacctggaacttttgctctgtctgctaacaattcactgggttgtactccatgt
ttctgcttcggtctgtcctcattttgttgggaagtagaagatcacgtgagaattcctata
accctaactcctgaccagtccattctgcatgtagtagctccaagtaacctgactggaaca
gtggaaggagtattttcacaattttctgacattttactggatgctaccattgtcagaaaa
tacttaaatacagaaacattttactggaggttaccagagcagtttcagggagaccagctc
atggcatatggaggcaagctgagatatactgttgctttttatgctttggatggctttgga
acttcaaattttgagccccagattctaatgaaagggggtcgtaccagcaaattggtcatc
tatgtagacatcccttccccagaaaatggagtaagaagtgacaaggaagtggaaatgaag
gaggattcttggaagtattttaattctgtgtctgaaaagcctgtctcacgttctgacttc
atgtctgtgctaagcaatattgaatacatccttatcaaggcagcctatggccaaggatta
cagcaaagcagaattgcaaatatctcaatggaaattgcagtgaagtttgaagagatgcat
cgaggcagatctagagctcaccttatagagcaatgtagatgtcctgctggttatactgga
ttttcctgtcagagctgtgctccaggatactacagggagaagcctacagaacttggtgta
agagagtctcatactatgatagcacgttgtttgccgtgtcagtgcaacaatcacagtgaa
acctgtgatcctgaaactggaaagtgcttgaactgcagagataatacagttggtgattac
tgcagtgcttgtgccccaggatactatggtaaagtaattggatctgtcaacgactgctct
ctttgtgcctgtcccagagccaaccctgttagttttagtcccacttgtgttctaaaaggt
gtccaagattaccactgtgatgcttgtctcccaggatatgaaggacaatattgtgaaaag
tgttcccttggctattacggtgatcctcagctgcctggaggcagctgccatccatgtcga
tgcaatccaagtggctctgttcacgttaattgtgatcgtgccactggcaagtgcctctgt
aagcagggagtgacaggacagctctgtgaggagtgtgaagcaaggcatcttcttgtggaa
ggagagtgtgtttcttgtgatgacaactgcacaggagttttgctaagtaatttagataat
ctcaaccaagccatactttcagtgaacctcactggtattgcccatgtgccctatggggta
ttgtcagagatggagaatgcaacaaaacatctgaaggggtctgttatttctagagaagat
ccaacttactcattagctacagcagaagaaagtcttctgagtttatctggaggttttgct
cagttgcctgaagagtcatctagaattttgaaaaaagcttggcagcttaacacaatgact
caggaaaccaggaataaaagtaaagaactgattgggtttattgacacggtacatacagcc
atcaaagtacttgctgaagttgcagtgtcactaaatgaaacactggatctcccactgcca
aatgctacatctcagagccttcaggatgatatttctgcccagctagatgcattgcgcaag
aaagattttggtcaacagcactacaatgctaccagtctcctgaaagctgcagaaaatttg
ttgctcctggttcaaaaagagtatcatagaccccagcaggagcttgctgagctgaaaaag
aatgcaagtcagctcttatcgaagcacagcagcagactgcaagatgcccaggatctggtg
aaggaggcactggctaacatcaatgagaccaatcgcttgtttcctcttatctctagcaac
ctgggagaattaaatgaaaaaaagctgaatataaaggaaggtaaagaagcctcaaccatg
cttattaaagaaggaaggatcctagtgaatgttgctgcttctgttgtccaggatgtaaag
aactctacatctaacctggaggtccaccaggatgggctagttctatggagtaccaacttg
cgacaccatgtggatgagctggtgatgcagatgtctgtgagaggagtgctcaacctggta
tacagagctgaagatcatgctgcccagttccaaagacttgcagatgcactggagagtggc
ctctctaaaataaggaacgtgactctgaatgcaactgctgctgtctacacccactccaat
gttaaaagtgtgattgaaagaacagagagtctggcagatgatgcatctagagttgtgaat
ggcccgttggatctgccagaggagtctctcagtcttcttggaaaagaagctctactgctt
agctccaaatttcaaaatgaagcaaaaaatctgaagaaaagaagtaatggccttgtattt
gaattgaatggattgaacaaaaaggtagaaaagcttcatgaaagtgctattaaaattgtc
aaccagcttaatgattccctgatgacactaaaagcattgcctaatggtacaaggaaatat
gtgcttgaggtgaaagagctggccgtgtctgcaaacaccagcaccgtggtgggtttaagc
cactttggggacttcaatcaaaagctcctgaatacttcgtctacattgtcccgagttaat
gacacattgaggaaaactagtgaacttataactgattcatcaaaagttgcaatcacagct
gaaaaacaagttaaagaggtcaaagcacaagcaagtcttttacttaataagctgaaacct
ctgaaaatactagaagagaacctcagcagaaatttgtctgaaattaaagagctcatcagc
caagcccgcaagcaggcagcatctattaaagttgcagtgtcagcagacagagattgcatt
cgtgcctaccaaccccagatttcatctacaaattacaacactctgacccttaatgtgaaa
actgctgaaccagataacctccttttctacctgggtagcaatggaaagacagacttcctt
gcagtagagatgcgacgcggtaaggtagctcttctttgggatttgggctctggatcaaca
agagtggaataccctgatcttcaaattgacaacaacaaatggcacagaatacacgcaacc
aggtttggaaaaacaggtacactcagcatagaggaaatgaactccaatcagaagtcttca
tctaaatctgcaacctctcctgggatagccagcatactagatgttaacaaatcaacactg
atgtttatcggaggacttggggggcaaatcaagaaatcacctgctgttaaggtgacacat
tttaaagggtgcatgggagaagcatccctgaatggcaaatctattggtctttggaactac
atggaaagagagggcacatgcaatgggtgttttggaagcccacaggatgaagacacttca
ttccattttgatggcagtggatactcagttgtggagaaggctcttcgctcaacagtgact
cagataataatatttttcagcaccttttcacctaatgggcttcttctatatcttacttca
aatggcactagagatttcttgtcccttgagcttgttgatggcaaagtgagactgactgtt
gatctaggttcaggacctcttgctcttacaacagaaaatcgttacaataatggaacctgg
tataaaatttcattcagtcggaacaagaaacaaggaatgctggcagttatggatgcatat
aaccttaattataaagaaaccaagcaaggagaatctcccggggttgcctcagacttgaac
cgctctgataaggacccaatcttcattggtgggctgccgagatcaagggctgtgagaaaa
ggtctgaatagtagaacgtatgtgggatgcatcaagaatctggaaatatcccgttcaacc
tttgacttgcttagaaattcatatggagtaagaaagggctgtgtattggagcctattcgt
actgtgaacatcttgaacaatggatatattgagttggaacctaagtctttaagtccagaa
tcagaactgatggcaacttttgctacaaagaacagcaatggcatcatccttgctggactc
agtagaagaatggagaagcgacaacgcagacaagcacatttgcccttcttttccatcatg
ctggttgatggtcatcttgcagtgcatattaatgctggagatagaacaagtactagaaaa
gtaattcttcagtctgctaatggaacgtacagtgatggacaagaacactctcttatccta
attcggaataagaggatcataactgtacaagtggatgaaagctccccttcagaactgagg
cttggttcatcaacagaaatgagtcccatgaatatttccaacttctatgctggtggcatt
ccagcaggagagagcttcttagggctaaaactgactggctcctttcgtggctgtatcagc
aatcttatttttaacaaggaacttttggatttcaccacttccatgaagtatgaatatgtg
gatatggacagctgctttttgtcagagaagcctaaaccagccatacagctagaagacttt
gatattcaacctgaacttcaggctttaccggctcccatgaggcctcttacagattcaaaa
aaagtagtatgtgcaaaagatgagctgcctgatcatgttcaaggtgcccatcagtttgga
cttgccaaaggcagccacttgacactgctcttcaatcagtctactgtcaggaagaaactt
tctgtccagctgaatctcagaacctttgcctccagtggtctgatttactacatggctcac
cagaaccaggttgattatgcagccctacagcttcatgggggacagctctatttctcattt
gatctaggccgaggaaaagcagtagcatttcaccctgctgttgtcaatgatggaaaatgg
catacgataaagacagaatacgctaaaagaaaaggtatcatcattgtggatggacatgaa
ttggtagcagtcagtgccctgggagatggcagcactttggatgtggaggggaaactgtat
gtgggaggactccccttggactatgtggcgaagaatcttgggaatgtgactcacagtatt
cctgcctgcattggcagcatgaccattaacagcaagcaactggataaggagagccctgtc
tccatctttgctgtgaataaatgctatgtaacagtgcaggaagggactttctttgatgga
agtggttttgctgctctttatagagaaggttacaaagtccggtctgatgtgaacatcacg
cttgagtttcgtacaacaggcttgaatggtgttctccttggggtcagcagtgctaaggtt
gatgccattggacttgagattgtaaatggcaaggttttattccatgtcaacaatggagct
ggcagaataacagctgcgtatgaaccaggagtcacaaatagtttatgtgatggaaaatgg
cacaagcttcaagcaaacaaaagcaaacatcgtatttcactgataattgatgggaatttg
gttcaaactgataatccctacattcagtcaacatctgcagacacaaacaatcccatttat
gttggaggttatcctggtgacgtgaagcaaaactgtctcacgagtaagagctcattccat
ggctgtttgaggaaccttgtgctgaacaagggccaacaggcagaattgtttgacttcagc
aaagcttttgacctgcgtggagtctttcctcattcctgccctggggatgagcactga
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integrated database retrieval system