Aythya fuligula (tufted duck): 116485861
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Entry
116485861 CDS
T07966
Symbol
PPFIBP1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aful04131
]
116485861 (PPFIBP1)
Membrane trafficking [BR:
aful04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116485861 (PPFIBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
Crescentin
DUF16
PUMA_CC
DUF4407
Motif
Other DBs
NCBI-GeneID:
116485861
NCBI-ProteinID:
XP_032037478
UniProt:
A0A6J3CJ87
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All DBs
Position
1:complement(75013915..75124746)
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AA seq
1007 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGGLRALHLVEDLRGLLE
MMEADEREGLRCQVPDSTAEALIEWLQSQMTNGHISGNGDVYQERLARLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFSLEEHRQKLNATEEMLQQELLSRTSLETQKLDLMAEISNLK
LKLTSVEKDRLDYEDRFRDTEDLIQEINELRLRVGEMDNERLQYEKKLKTTKDELAALKE
KLEQKEAEVKRLQEKLVCKLKGEGIEILDRDENCKKKLKDKNIEVQKMKKAVESLMAANE
EKDQKIEELRQSLNRYKKVQDMVILAQGKKGKESDSEDFLHSGSVSTVLLDTPTLTDPEK
SPSPTPVTASPIHDEFNMNIHEENTLQIHTSVLQISIPSFSSTSKSSEIVAEKVKTQPRS
DPASDLSEGRSTGSSPGTQLCDGPATSPLQKSSSLSSLKKETYEADRDPAQKPTEVKPPM
EGNNFATVPPKSPSHGVTGDEDSFGTRKARSSFGRGFFKIKNNKRTASAPNLDRSRSASA
PTLAETEKGSADHLDLAGLPPRPKETDSLQMTPPSPDSKKKARGIKKFFGKLKRSQSTTF
NLDDMSETEFKRGGTRATAGPRLGWSRDLGQSHNELDMPFAKWTKEQVCNWLQDQGLGSY
ISNGRQWILSGQTLLQASQQDLEKELGIKHPLHRKKLQLALQALGSEEENNHGKLDYHWV
TRWLDDIGLPQYKTQFDEGKVDGRMLHYMSVDDLLSLKVVSVLHHLSIKRAIQVLRINNF
EPNCLRRRPSDESSVTPSEVTQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRF
NVETMAQLLNIPPNKTLLRRHLATHFNLLIGQDAQQKKREAMESPDYVLLTATAKVKPKK
LAFSNFGSLRKKKQDDVEEYVCPMELGRASGSGSKKGFKPGLDIRVYDDDDLDRLEQMED
SEGTVRQIGAFSEGINNLTHMLKEDEMFKDFATRSPSTSITDEDSNV
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgatgcaagtgacatgcttgctgcggctttggaacagatggatggcattata
gcaggttcaaaggcactggaatactccaatggcatttttgactgccagtcccccacttcc
cccttcatggggggcctgcgggcactgcacctggtggaggacttgcggggcttgctggag
atgatggaagcagacgagagagaggggctgcgctgccaggtcccagactcgacggcagag
gctctgattgaatggctccaaagtcaaatgactaatggacacatatctgggaatggagat
gtatatcaagaaaggctggctcgtctggaaaatgataaggaatctcttgttctgcaagta
agtgtgcttacggatcaggtggaggcccagggagaaaagattcgggatctggagttctct
ttggaggaacacagacagaaactaaatgccacagaagagatgctgcagcaggagcttttg
agcagaacatcccttgaaactcagaagctggatcttatggcagagatatccaatctgaag
ttgaaacttacatctgtagagaaggatagattggactatgaggatagattcagagacaca
gaggatttgatccaggaaattaatgaattgcgattaagagtgggagagatggacaatgaa
agactccagtatgagaagaagcttaaaacaaccaaagatgaactagcagctttgaaagag
aaactggagcagaaggaagctgaggtaaaaagattgcaagaaaaattggtttgcaagctg
aaaggagaaggaattgaaatactggacagagatgaaaattgtaaaaagaagctgaaagat
aaaaatatagaggtacagaaaatgaagaaggcggtagaatcccttatggcagcaaatgaa
gagaaggatcagaagatagaagagcttcgacagtctctgaataggtacaagaaagttcaa
gacatggtgatactggctcaaggtaaaaaaggcaaggaaagtgacagtgaagatttcttg
cattcaggatcagtttctacagttttattggacacaccaactctgactgacccagagaaa
agtccatccccaactcctgtaacagcatctccaatccatgatgagtttaacatgaatatt
catgaagagaataccttacagatccacacaagtgttttacagatttcaatcccatctttt
tcatcaacgtccaagagttcagaaattgttgcagagaaagtgaaaacacagcctaggtca
gatcccgcaagtgatttgagtgaaggaagatcaactggttcctccccaggaactcagctg
tgtgacggtccagcaacttctccactgcagaagtccagcagtctaagcagtttgaagaag
gagacatatgaagcggacagagaccctgcacagaagccaacagaggttaaacctccaatg
gaaggtaataattttgcaactgtccctccaaaatctccttctcacggtgtcacaggagat
gaggatagttttggtacccgtaaagccagatcttcatttggacgaggctttttcaagata
aaaaataacaagaggactgcaagtgccccaaatctggatcgcagtcgaagtgcaagtgca
cctaccttagctgaaacagaaaaaggatctgcagatcacttggatctggctggcttgccc
cctcgaccaaaagaaacagatagtttacagatgactccgccttctccagattccaagaaa
aaggccagaggaatcaagaagttttttggaaaacttaaaagaagtcagtctaccaccttc
aacctagatgacatgtccgagactgagttcaaaagaggagggacaagagcaactgcaggg
ccgcgactaggctggtctcgagacctggggcaatctcacaatgagctggacatgccattt
gccaagtggacgaaagagcaggtttgcaactggctccaggaccaaggactaggctcttat
ataagtaatggcagacaatggatactgtcggggcaaacacttcttcaggcttctcagcag
gatttggaaaaggagcttgggataaagcacccattgcatcggaagaagcttcagcttgct
ctgcaggcgcttgggtctgaagaggaaaacaatcatggaaaactggattaccactgggtt
acaaggtggctggatgacattggcctcccccagtataagacccagttcgatgaaggaaag
gtggatggccgaatgcttcattacatgagtgtggatgacttgctgtccttgaaagttgtc
agtgtcctccaccacctcagcatcaaaagggccatccaagttctgagaataaataacttt
gagcctaactgtctgcgcaggaggccatcagatgagagtagtgtcacaccttctgaagtc
acccagtggaccaatcatcgtgtgatggagtggttacgctctgttgatctggcagagtat
gcacctaatctgcgggggagtggtgtgcatgggggactgatggttttggagccacgtttc
aatgtagaaaccatggcgcaattgctaaacatcccaccaaacaagacactgttgcgacgg
cacttggcgactcatttcaacctcctcattgggcaggatgcccagcagaagaaacgtgaa
gccatggagtccccagactatgtcctcttaacagcaactgccaaagtaaagccaaagaaa
cttgccttcagcaattttggaagcctgaggaagaagaagcaagatgatgtggaagagtat
gtgtgtcctatggaactggggagggcttctggaagtgggtcaaagaagggttttaagcct
ggcctggatatccgagtgtatgatgatgacgatttggacagactggagcagatggaagat
tcagaagggacagtgaggcaaataggagcattttctgaaggcatcaacaacttaacacat
atgttaaaagaagatgaaatgtttaaagactttgcgactcgctctcctagcaccagtata
acagatgaggactctaacgtgtga
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