Aythya fuligula (tufted duck): 116486298
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Entry
116486298 CDS
T07966
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116486298 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aful01007
]
116486298 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aful03016
]
116486298 (GARS1)
03029 Mitochondrial biogenesis [BR:
aful03029
]
116486298 (GARS1)
Enzymes [BR:
aful01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
116486298 (GARS1)
Amino acid related enzymes [BR:
aful01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
116486298 (GARS1)
Transfer RNA biogenesis [BR:
aful03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116486298 (GARS1)
Mitochondrial biogenesis [BR:
aful03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
116486298 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
EcoRII-C
DUF3993
DUF5915
Motif
Other DBs
NCBI-GeneID:
116486298
NCBI-ProteinID:
XP_032038307
UniProt:
A0A6J3CN82
LinkDB
All DBs
Position
2:complement(5009173..5036072)
Genome browser
AA seq
685 aa
AA seq
DB search
MDGPAAEGVLAPLRQAVRHQGELVRKLKEEKAPQVDIDKAVAELKARKRILEAKELALQP
KDDIVDRVKMEDTLKRRFFYDQAFSIYGGVSGLYDFGPVGCALKNNIIQAWRQHFIQEEQ
ILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCTAE
KKAEMENVITQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTSIGPGGNMPG
YLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF
VDPSEKSHPKFENVADLNILLYSSKAQVSGQSAHIMRLGDAVQQGVINNSVLGYFIGRIY
LFLTKVGVSPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHAR
ATKVPLVAEKLLKEPKTVNIVQFEANKGAIGKAYKKDAKVVLEFLSMCDECYITEREQLL
NDKGEFTVETEGKTFTLTKDMVTVKRFQKTLHVEEIIPNVIEPSFGIGRIMYTVFEHTFR
IREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRNGISHKVDDSSGSI
GRRYARTDEVGVAFGITIDFDTVNRTPHTATLRDRDSMRQIRAEISELPAVIRDLANGYL
TWADVEAKYPQFEGQETGKKDTIEE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggacggcccggccgccgaaggggtgctggcgccgctgcggcaggcggtgcggcatcag
ggagagctggtaaggaagctgaaggaagagaaggctccccaggtggatatagacaaagct
gtagcagagctcaaagctcggaagaggatcctagaagcgaaggagctggccttgcagccc
aaagatgacatcgtggacagagttaaaatggaagacaccctgaaaaggaggtttttctac
gatcaagccttctctatttatggaggtgtcagtgggctatatgacttcgggcctgttgga
tgtgctttgaagaacaacatcatccaggcatggagacagcactttatacaggaggagcaa
atcctggagattgactgcaccatgctcacgccggagccagttttgaagacttctggccac
gtagacaagtttgctgacttcatggtgaaagatgtgaaaaatggggagtgttttcgtgct
gatcatctcttaaaagctcatctgcagaagcttatgtctgacaagaagtgcacagcagag
aaaaaggcagaaatggaaaatgttatcacacagttggacaactatggccagcaagagctt
gcagatctctttgtgaactacaacgtgaagtctcctatcactgggaatgacctttcccct
cctgtttctttcaatctgatgttcaagacctccattgggcctggaggaaacatgcctggc
tacctgaggccagaaactgcacagggaatattcctcaacttcaaacgtcttctggagttt
aaccaaggcaaactcccttttgctgcagcccagattggaaactccttcagaaatgagatc
tcgccccgctctggccttatcagagtgagggaattcaccatggcagaaattgagcacttt
gtggatcccagtgagaaaagtcatcccaaatttgagaacgtggcagatctgaacatcctc
ctgtattcttccaaggcccaggtcagcgggcagtccgcccatataatgcggctgggagat
gctgtccaacagggtgtgatcaataactccgttcttggttacttcatcggcagaatctac
ctcttcctcacaaaggtcggcgtttccccagacaagctgcgcttccgacagcatatggag
aatgagatggctcattacgcctgtgactgctgggacgcggagtccaaaacatcctatggc
tggatcgagatcgttggctgtgctgatcgttcctgctatgacctctcctgccatgcccgt
gccaccaaagttcctcttgtagctgagaagcttctcaaagaacctaaaacagtcaacatc
gttcagttcgaggcaaataagggagccattggcaaagcttataagaaggatgcaaaggtg
gtgctggagttcctatccatgtgtgatgagtgttacatcaccgagagggagcagctgctg
aatgacaaaggggaattcactgttgaaaccgaagggaaaacttttacattaacaaaggac
atggttactgtgaagagatttcagaaaacattacacgtggaagaaatcatcccaaatgta
atcgagccctcatttggtattgggaggatcatgtacacggtgtttgagcacacgttccgc
attcgggaaggagacgagcagagaacgttcttcagcttcccagctgttgtagcaccattc
aagtgctctgttcttcctctaagccagaatcaggaattcatgccgtttgtcaaggaatta
tctgaagcactcaccaggaacggcatctctcacaaggtggacgattcctccgggtccatc
ggccggcgctacgccaggactgacgaggttggcgtggcttttgggatcacgatcgacttc
gacaccgtcaaccggacgcctcacacggccaccctgagagaccgggactcgatgcgccag
atccgagccgagatctctgaacttcctgctgtcatccgtgacctggcgaacggttatctg
acttgggctgacgtggaggcaaagtacccacaatttgagggacaagagactggcaaaaag
gacacaatagaggaataa
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