Aythya fuligula (tufted duck): 116486437
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Entry
116486437 CDS
T07966
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116486437 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aful01002
]
116486437 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aful00536
]
116486437 (SHH)
Peptidases and inhibitors [BR:
aful01002
]
Cysteine peptidases
Family C46: hedgehog family
116486437 (SHH)
Glycosaminoglycan binding proteins [BR:
aful00536
]
Heparan sulfate / Heparin
Morphogens
116486437 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
116486437
NCBI-ProteinID:
XP_032038559
UniProt:
A0A6J3CKI1
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Position
2:complement(8979489..8989082)
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AA seq
425 aa
AA seq
DB search
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEHGGTKLVKDLSPGDRVLAADADGRLLYSD
FLAFLDREDGSRKIFYVIETRQPRARLLLTAAHLLFVAPQHNQSQILGPARGHALYASRV
RPGQRVYVLGEGGRQLLPAAVHRVTLKEEASGAYAPLTAQGTILINRVLASCYAVIEEHG
WAHWAFAPFRLLQGLLAAICPGGDTPVTATTTTGVHWYSRLLYRIGSWVLDGDALHPLGM
VAPAS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggacaagctgaacgccctggcgatctcggtgatgaaccagtgg
cccggggtgaagctgcgggtgaccgagggctgggacgaggacggccaccactccgaggag
tcgctgcactacgaggggcgcgccgtggacatcaccacgtcggatcgggaccgcagcaag
tacggcatgctggcccgcctcgccgtcgaggccggcttcgactgggtgtactacgagtcc
aaggcgcacatccactgctccgtcaaagcagaaaactcggtggcggccaaatccgggggc
tgcttccctggctcggccacggtgcacctggagcacggcggcaccaagctggtgaaggac
ctgagccccggggaccgtgtgctggcggccgacgctgatggccggctgctctacagcgac
ttcctcgccttcctcgaccgcgaggatggctcccgcaagatcttctacgtcatcgagacg
cggcagccacgggcccggctgctgctgacggcagcccatctgctcttcgtggccccccag
cacaaccagtcgcagattttggggcctgccagaggccatgccctctatgccagccgtgtg
aggccgggccagcgcgtctacgtgctgggcgagggcgggcggcagctgctgccggcggct
gtgcaccgcgtcacgctgaaggaggaggcgtcgggggcttacgccccgctcaccgcccag
ggcaccatcctcatcaaccgggtgctggcatcctgctacgccgtcatcgaggagcacggc
tgggcccactgggccttcgcgcctttccgcttgctccaggggctgctggccgccatctgc
cccggcggcgacacccccgtcaccgccaccaccaccaccggcgtgcactggtactcgcgg
ctcctctaccgcatcggcagctgggtgctggatggcgacgcactgcacccgctgggcatg
gtggcgccggccagctga
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