Aythya fuligula (tufted duck): 116486447
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Entry
116486447 CDS
T07966
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116486447 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116486447 (DROSHA)
03009 Ribosome biogenesis [BR:
aful03009
]
116486447 (DROSHA)
03036 Chromosome and associated proteins [BR:
aful03036
]
116486447 (DROSHA)
Enzymes [BR:
aful01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
116486447 (DROSHA)
Messenger RNA biogenesis [BR:
aful03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
116486447 (DROSHA)
Ribosome biogenesis [BR:
aful03009
]
Eukaryotic type
90S particles
RNase
116486447 (DROSHA)
Prokaryotic type
rRNA processing factors
116486447 (DROSHA)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
116486447 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
YcaO
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
116486447
NCBI-ProteinID:
XP_032038580
UniProt:
A0A6J3CJD3
LinkDB
All DBs
Position
2:complement(78757916..78826160)
Genome browser
AA seq
1336 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGARTSTQTYRPQNLRQIHPQQPSVQYQYDQQTAPPTSYSNPPAT
GYMPPRPDFVPYPPPVPPSTQNPISQCPMRPPFPSHQMRQSFPVPPCFPPAPPPVPTPSN
APVPATPTGQSTFPYMMPPPAVPHPPPPPVIPQQVSYQPVYSTGYSQQSFPPPNFNSYQH
NSGSFQSSTTNSSGGSTHFRHTGQYQGEKSQSDRRSPERNKHYDEHRHREHSHIHGDRHR
SNNHGDRRDRGRSPDRRRQESSRHRTDYDRGRISPHHRSYERSRERERERHRHRDSRRSP
SPDRSYKKDYKRTGSCSPSRERKRPRWEEDRERWSESQSASKEKSYTSIKDKESEENTSE
KNEDEDDELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSKLRDLYEKFEEELGKRQAK
AKAARPPWEPPKTKLDEDLESSSDSDCDSEDDSSCSSSSDSEVFDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFSHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVKGLELFSSYLFKDILELYDWNLKGPSLEDDAISCPRFHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCNKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLD
REQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKL
SQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMH
LDKLIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMR
KKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGLAT
YRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLE
EAKQLFGRLLFNDKDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVIF
THVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLR
SSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVH
TFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTY
TVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWE
REHQEREPDETEEARK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattccggacgaggatgtccccgtggtcaggggggaccaggagcaagaact
tccacacagacttaccgccctcagaacctgcggcagattcacccgcagcagccctctgta
caataccagtatgaccagcagactgcacctccaacctcctattcaaaccctccagccact
ggttacatgccacccaggccagactttgtgccgtatcctcctccagtgcccccttccacg
cagaatcccatcagccagtgtcccatgaggccaccgtttccaagccatcagatgaggcag
agcttcccggtgcctccgtgcttccctcctgctcctccaccagtgccaacccctagcaat
gcccccgtgccagcaactcctactgggcaaagcacgtttccatacatgatgccccctccg
gcggtaccacatcctcccccaccgccagtcataccacagcaggtcagctaccagcctgtg
tattccacagggtattcgcagcagtcattcccaccacccaacttcaacagctaccagcac
aactctggctcttttcagagcagcacaaccaacagcagtggtggcagcacccattttcgg
cacacgggccaataccagggagagaagtcgcaaagcgatcgacggtctccagagaggaac
aagcactacgatgagcaccggcatcgtgagcacagtcacatccatggggacaggcatcgg
tccaataaccacggggatcggcgggatcgaggccggagccctgacaggaggaggcaggaa
agcagtcggcaccggacagattatgacagaggaaggatatcacctcatcatagaagttac
gagcgtagcagggagcgggagagggagaggcataggcaccgtgacagcagaagatcacca
tcaccagacagatcatacaaaaaagattacaagagaacaggaagctgctctccaagcaga
gaaaggaagagaccccgatgggaggaggacagagaaaggtggtctgaaagccagagtgcc
agtaaagaaaaaagttacactagtatcaaagacaaagagtcagaggagaatacatctgaa
aagaatgaagatgaagatgatgaattgcttaagccagtctgggttcgctgtacccattct
gaaagctactattcaaatgaccctatggatcaagtgggagactcaactgtagtaggaaca
agcaagctccgagatctgtatgaaaagtttgaagaggaattaggaaagcgacaggcaaag
gccaaagcagccagaccaccatgggagccaccaaagaccaaactggatgaagatttggag
agctccagtgactcagactgtgactctgaggatgacagcagctgctctagcagttcggat
tcggaagtttttgatgtcattgccgaaattaagcgtaaaaaagcacaccctgatcgtctc
catgaagaactgtggtacaatgatccaggacagatgaatgatggaccactgtgcaaatgt
agtgctaaagcccgaagaacagggataaggcatggcatttatcctggtgaagagcctatt
aaaccatgtcgccccatgaccaacaatgccggaaggctataccactaccgaattacagtg
tcgcctcccacaaacttcttaacagacagacctactgttattgagtatgatgaccatgaa
tatatctttgaagggttctccatgttttcacatgccccactaacaaatattcctctatgt
aaagtaatcagatttaacattgactataccattcatttcattgaggagatgatgcctgag
aatttttgtgtgaaaggtcttgagctgttctcttcgtatctattcaaagatattttggag
ctctatgactggaatcttaaaggaccttcacttgaagatgatgctatttcctgccccaga
tttcatttcatgccgcgatttgtgaggttccttccagatggagggaaagaagtactatca
atgcatcagattctcctctacttgttacggtgcaataaagctctggtgcctgaagaagag
attgccaacatgcttcagtgggaagagctggaatggcagaaatatgcagaagaatgcaaa
gggatgatcgtcaccagccctggcatgaaacccagctcagttcgtattgatcaactggac
cgcgaacaattcaatcctgatgtaattactttccctattattgtccactttgggatacga
cctgctcaactcagttatgctggagatcctcaataccaaaagctgtggaagagttacgtg
aagctgcgtcacctgctggctaacagtcccaaagtcaaacaggctgataaacagaaatta
tcacagagagaggaagcactgcagaaaatccggcagaagaacacgatgaggcgtgaagtg
actgttgaattgagtagccagggattctggaaaacaggaatacgctccgacgtctgccag
cacgcaatgatgcttcctgttctcacccaccatattcgctaccatcagtgtctgatgcat
ttggacaaattgataggctacacttttcgagataggtgcttgctgcagcttgccatgact
catccaagccatcacttaaactttggaatgaatccggaccatgccagaaattccttatcc
aactgtggaattcgacagccaaagtacggagacagaaaggttcatcatatgcatatgaga
aaaaaagggataaacaccttgataaatattatgtcccgtttgggacaggatgatccagct
ccttccaggattaaccacaacgagcgtttagaatttctgggagatgctgtggtagaattc
ttaacaagtgtccacttgtactacctgtttcccactctggaggaaggaggactagctaca
taccgcaccgccatcgttcagaaccaacatctggccatgctggctaagaagctggaacta
gatcgattcatgctttatgcccatggtccagacctttgcagggaatcggatctccgccat
gccatggccaactgctttgaagccctgataggagctgtttatctagaagggagcctagaa
gaggccaaacaattatttggacgtttgctcttcaatgacaaggacctgcgggatgtatgg
cttaattatccactgcacccactccaactgcaggagtctaatactgacaggcaactcatt
gagacatctccagttcttcaaaagcttacggagtttgaggaggcaattggagtcatcttt
actcatgttcggcttctagcacgtgcgttcactctgaggacagtaggctttaaccacctg
actctaggccacaatcagaggatggaattcctgggtgactccataatgcagctggtagcc
acagagtatttattcatacatttccctgatcatcatgaagggcacttaacgctgttgaga
agttctttggtgaacaacaggacacaggccaaagtggcagaagagctgggaatgcaagag
tttgccatcactaatgacaagacgaaaagacctgtagctcttcgaactaagactttggct
gatctcttggaatcctttattgctgccctatacattgataaagatttggaatatgttcac
actttcatgaatgtatgcttttttccacggctaaaggagttcattttaaatcaagattgg
aatgaccctaaatctcagcttcagcaatgctgcttgactctcaggactgaaggaaaagaa
ccagacattcctctttacaagactctacagacagtgggaccatctcatgccaggacatac
acagtagctgtttatttcaaaggggaaagaataggatgtggtaaaggcccaagtattcag
caagcagaaatgggagctgcaatggatgcacttgaaaaatataactttccccagatggcc
catcagaaacggttcattgaacggaaatacagacaagagttgaaagaaatgaggtgggaa
agagagcatcaagagagagagccagatgaaaccgaagaagcaaggaaataa
DBGET
integrated database retrieval system
