Aythya fuligula (tufted duck): 116487048
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Entry
116487048 CDS
T07966
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aful03000
]
116487048 (HMBOX1)
Transcription factors [BR:
aful03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116487048 (HMBOX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_37
HTH_26
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
116487048
NCBI-ProteinID:
XP_032039459
UniProt:
A0A6J3CQA6
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All DBs
Position
3:complement(116988795..117094405)
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AA seq
465 aa
AA seq
DB search
MLRTFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETLDRLDQEHSDK
FGRRSSYGGGSYSNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
SNERLSAFNGKMSPTRYPLANSLAQRSYSFEASEEDLDIDDKVEELMRRDSSVIKEEIKA
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMR
PAPIPIEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREE
IANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPG
GHSNSDDVDGNDYSEQDTWQVRNGEEEGRCSEGGREAEKVEEDRRICSKQASYTIHATRN
DDSTSHSDHQDPISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaacttttccagtagttctgctggaaaccatgtctcactacacagacgaacca
agatttaccatagagcagatagacctgcttcagcgcctgagacgtacgggaatgaccaga
catgaaatccttcacgcgctggaaaccttggatcgtcttgatcaagagcatagcgacaaa
tttggaagaaggtctagctacggaggtggttcctacagcaacagcaccaacaatgtccca
gcatcttcctctacagccacagcttcaacacagacccagcattcggggatgtccccgtca
ccgagcaacagttacgacacctccccacagccttgcactactaatcagaacgggagggag
agtaacgagaggttgtctgcgttcaacgggaagatgtcacctacccgctacccgctcgca
aacagcctggctcaaaggtcgtacagttttgaagcttcggaagaggacttggacattgat
gacaaagtggaagagctgatgaggagggacagcagtgtgataaaggaggaaatcaaagcc
ttcctagccaatcggagaatttcccaagcagttgttgcacaggtaacaggtatcagtcag
agccggatctcccattggctgttgcagcaggggtcggacctgagtgaacaaaagaaaagg
gcattttacagatggtaccagcttgagaagacaaatcctggggctacgttaagcatgaga
cccgctcctatcccaatagaagagccagaatggagacagacgcctcccccagtcacagct
acctcggggaccttcagactacggcgaggcagtcggttcacgtggagaaaggagtgcctg
gctgttatggaaagttacttcaatgagaatcaatatcctgacgaggcaaagagagaagaa
attgcaaacgcctgtaatgcagttatacaaaagccaggaaaaaagttatcggatttggag
cgagttacctcccttaaagtgtacaattggtttgccaacagaagaaaggaaatcaagaga
cgagccaatatcgaagcagcaatcctggagagccatggaatagatgtacagagtccggga
ggtcattccaacagtgacgacgttgatggcaatgactattcagagcaggacacttggcaa
gtacgcaatggggaggaggagggaagatgttcagagggaggcagagaagcagagaaggta
gaagaagacaggaggatctgctccaaacaagcaagttacaccattcacgccacacgcaat
gatgacagcactagccatagtgaccaccaagaccccatctcgttagccgtggaaatggca
gcggtaaaccacaccatcttggcattggcccggcaaggagccaacgagatcaagacagag
gctctagacgacgactga
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