Aythya fuligula (tufted duck): 116487278
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Entry
116487278 CDS
T07966
Symbol
HBS1L
Name
(RefSeq) LOW QUALITY PROTEIN: HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116487278 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116487278 (HBS1L)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116487278 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
116487278
NCBI-ProteinID:
XP_032039933
UniProt:
A0A6J3CRN3
LinkDB
All DBs
Position
3:complement(82708190..82768557)
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AA seq
687 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATCAEPLEEEYG
YEGTEDTAGYFASNHQLDDVDRARLNSCLDQMREVLAESVPEQTMVQAVLDSKFDVQKAL
DLVLSQGSKQNVKTHNEDAMIVGKTTKGKSRDSQSARMESEIVPKVTKMTVSGKKQSMGF
EVPCMIAEENGHANTPQKGLLNEDASITSGVIEAVSKSALSPQVAQVSEEQNAMPTPVKK
TSKTKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDXGMTKFETKTKVITLMDAPGHKDFIPNMIT
GACQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRSQSSDLTKWYTGKCLLEQIDSF
KPPQRSVEKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNENLHCKGITLH
DEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARILIFNIEVPITKG
FPVLLHYQTVSEPATIRRLLSVLHKSTGEVTKKKPKFLTKGQNALIELQTQRPVALELYK
DFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcaccgcaacgtccgaggctacaactacgacgaagattttgaagacgatgat
gtgtatggccaatcagtagaagatgactattgcatttctccttcaacagccgctcagttt
atctactcaagacgagacaaaccagcaacatgtgctgagccgttagaagaagaatatggc
tacgaaggtacagaagatactgctggttattttgcatccaatcatcagttggatgatgtt
gatagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtctgta
ccagaacaaacaatggtgcaagcagtactggatagtaaatttgatgtacagaaggctttg
gatctcgtgctttcccaaggcagtaagcaaaatgtgaagacccacaatgaggatgctatg
attgtaggaaagacgacaaaaggaaaatcaagggattcccagtcagccagaatggaatct
gaaattgtgccaaaagttaccaaaatgacagtgtctggaaagaaacagtctatgggattt
gaagttccatgcatgattgctgaagaaaatggccatgctaacacacctcaaaaaggactg
ctaaatgaagatgctagcataacttctggggtaattgaggcagtctcaaaatctgctctt
tcaccccaagtagcgcaggtttcagaagagcagaatgccatgcctactccagtaaaaaag
acgagcaagacaaaaccacaaatagatgtgaaagcagagttggagaagagacaaggagga
aagcaactactaaatttggtggtaataggacatgttgatgcaggtaaaagtactttaatg
ggtcatctactctaccttttgggaaatgtgaacaaaagaactatgcacaaatacgaacag
gaatctaagaaggctggcaaagcttcgtttgcttatgcatgggtcctggatgaaactggg
gaagaaagagaaaggggagtaacaatggatngtggcatgaccaaatttgagacaaagact
aaagtaattacattgatggatgctccaggccacaaagacttcattccaaatatgatcaca
ggagcttgccaggctgatgtagctattttggttgtggatgccagcagaggagagtttgaa
gctgggtttgagacaggtggacaaactcgagaacatggattattagtgcgttctcttgga
gtgacacagctggctgttgcagtcaataaaatggatcaggtcaattggcagcaagaaaga
tttcaggaaattaccagtaagcttggccaatttcttaaacaagctggctttaaggaatct
gatgtggcttatattccaacgagtggtcttggtggtgaaaatctagtgacaagaagtcag
tcaagtgaccttacgaaatggtatacaggaaagtgtttgttagagcaaattgattctttc
aagccaccacaaagatcagtagagaaaccatttaggttgtgtgttgctgacgtttttaaa
gaccaaggatcaggattttgtgtgactggaaaaatagaagcaggctatattcaagttgga
gaacgacttctggcaatgcctcctaatgaaaacttgcactgcaaaggaatcacactgcat
gatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatg
gatatcatcaaaatcaacgttggctgtgtattttgtgatcccaaggagcccattaaagtt
tgcactcgattcagagctcggattctcatttttaatattgaggttccaatcactaaagga
ttccctgtgcttttacactatcaaaccgtaagtgaacccgctactattagaagattattg
agtgtcctgcacaaaagcactggtgaagtgacaaagaaaaagcctaagttcctgaccaaa
ggccagaatgctttaatagaactacagactcaaaggcctgttgctctagagttgtataaa
gattttaaagagcttgggaggtttatgttacgctacagtggttcaactattgctgcagga
gttgtcacagagattaaagaatga
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