Aythya fuligula (tufted duck): 116487549
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Entry
116487549 CDS
T07966
Symbol
TRIM54
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116487549 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aful04121
]
116487549 (TRIM54)
Ubiquitin system [BR:
aful04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116487549 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-RING_5
zf-B_box
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
CYP38_PsbQ-like
Prok-RING_4
Zn_ribbon_FGT1_2
RHH_9
DUF5799
CagA
FlgN
Motif
Other DBs
NCBI-GeneID:
116487549
NCBI-ProteinID:
XP_032040436
UniProt:
A0A6J3CN21
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All DBs
Position
3:complement(119168922..119171892)
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AA seq
433 aa
AA seq
DB search
MNFAVGLKPLLAEARSMESLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSSAVPSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESARPLHAKA
EQHLMCEEHEDERINIYCLRCEAPTCSLCKVFGAHKDCEVAPLPAVYQRQKVALVAGWPX
AGVQVPPPALALMPVSPQSELSDGIAMLVAGNDRIQAIITQMEEICRTIEENGRRQKQHL
GLRFDSLYSILEERKKELLQSIAREQEEKVQRVRGLIRQYGDHLEASSKLVETAIQAMEE
PQMAVYLQHSKELLKKITDMSKVSMSSRPEPGYENMDHFSINVDYVAEMLRTIEFQTEPL
GEDEGDGPMEGSEAAADEDRLDSLEAPEAAEDVGPRQKPASSPHGETLPGTKASVEQGTG
TSCGVLWGGGGTS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcggtggggctgaagccgctgctggcggaggcgcggagcatggagagcctg
gagaagcagctcatctgccccatctgcctggagatgttcaccaagcccgtggtcatcctg
ccctgccagcacaacctctgccgcaagtgcgccaacgacgtcttccaggcctccaacccg
ctgtggcagtcgcggggctccagcgcggtgccgtcgggcggccggttccggtgcccgtcg
tgccgccacgaggtggtgctggaccggcacggggtgtacgggctgcagcggaacctgctg
gtggagaacatcatcgacatctacaagcaggagtcggccaggcccctgcacgccaaggca
gagcagcacctgatgtgcgaggagcacgaggacgagcggatcaacatctactgcctgcgc
tgcgaggcgcccacctgctccctctgcaaggtcttcggggcgcacaaggactgcgaggtt
gcgccgctgcccgcggtctaccagcgccagaaggtagctctggtggccgggtggcccntg
gcgggggtccaggtgccgcctcccgctctggccctcatgccagtctcaccccagagcgag
ctcagcgatggcattgccatgctggtggcggggaacgaccgcatccaggccatcatcacc
cagatggaggagatctgccggaccattgaggagaacggtcggcggcagaaacagcacctg
gggctgcgcttcgactcgctgtacagcatcctggaggagcggaagaaggagctgctgcag
agcatcgcgcgggagcaggaggagaaagtgcagcgtgtgcggggcctcatccgccagtat
ggtgaccacctggaggcttcctccaagctggtggagacagccatccaggccatggaggag
ccccagatggcagtgtacctgcagcactccaaggagctcctgaagaagatcacagacatg
tccaaggtgtcgatgagcagccgcccggagcctggctacgagaacatggaccacttctcc
atcaatgtggactatgtggcagagatgctgaggaccatcgagttccagacagagccactg
ggagaggatgagggggacggccccatggagggcagcgaggctgcggcggatgaggaccgg
ctggacagcctggaggcacccgaggctgctgaggatgtggggccgaggcagaagccagca
agctctccacatggtgagaccctccccgggaccaaagccagtgttgagcaggggacaggg
acaagctgtggggtgctgtggggtggagggggcacctcctga
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