Aythya fuligula (tufted duck): 116487611
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Entry
116487611 CDS
T07966
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful00100
Steroid biosynthesis
aful01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
116487611 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
aful01006
]
116487611 (FDFT1)
Enzymes [BR:
aful01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
116487611 (FDFT1)
Prenyltransferases [BR:
aful01006
]
Terpene biosynthesis
Squalene/phytoene synthase
116487611 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
116487611
NCBI-ProteinID:
XP_032040551
UniProt:
A0A6J3CNC1
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Position
3:complement(115813255..115828685)
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AA seq
418 aa
AA seq
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MELLRTWLGHPEDIYNLLRFKMGGYRAVMPRIDPDSLGLGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTIEDDMTISLDVKVPMLHEFHSYLYQPDWRYMESKEKDR
QVLEDFPTISMEFRNLSKVYQDVISDICHKMGVGMAEFLEKKVDSQREWDKYCHYVAGLV
GIGLSRLFSASELEDPIVGQDTELANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRY
AKKLSDLAKPENIDMAVQCLNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNKQVFRGVVKIRKGQAVTLMMDATNIQAVKAIMYQYVEEIYQKIPSTDPSSNKT
QQIIASIRTMSLPGGPMASRHHYSPIYLSCAMLLAALSWQYLSTISKAAEEYVQAGEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgcggacatggctggggcaccccgaggacatctacaacctgctgcgcttc
aagatgggcggctaccgggctgtcatgccgcgcatcgacccggactcgctgggactcggc
ctccgcacctgctaccgctacctcaaccagaccagccgcagcttcgccgccgtcatccag
gccctggacggagagctgcgccacgccgtctgcatcttctacctagttctgcgtgccctg
gacaccatagaggatgacatgaccatcagcctggacgtaaaggtcccgatgctgcacgag
tttcactcctatctctaccagccggactggaggtacatggagagcaaggagaaggaccgc
caggtgctggaggacttccccacgatctccatggagttcaggaacctgtcgaaagtctac
caggatgtgatttcagacatttgccacaagatgggcgtcgggatggccgagttcttggag
aagaaagtcgattctcagcgggagtgggataagtactgtcactacgtagctgggctggtg
gggataggcctttcccgtctcttctctgcatcagagctagaagatccgattgtcgggcag
gacacggagctggcaaactccatgggcctcttcctgcagaaaaccaacatcatccgtgac
tatctggaggaccagctggagggaagggagttctggcccagagaggtttggagcagatat
gcaaaaaagctctcggaccttgccaaaccagagaacatcgatatggctgtccagtgtctg
aacgagctcatcaccaacgccctccaccatgtccctgatgtccttacgtatctgtcccgc
ctgaaaaaccaaagtgtcttcaacttctgtgctatcccccaggtgatggccatcgccact
ctggctgcctgctataacaacaagcaggtgttcaggggcgtagtgaagatccggaaggga
caagccgtcactctgatgatggacgccacaaacatacaggctgtcaaagccatcatgtac
cagtacgtggaagagatctaccagaagatccccagcaccgacccttcctccaacaagacg
cagcagatcatcgcctccatccgcaccatgagcctgcccggcggccccatggcctcgcgc
caccactactcccccatctacctgtcgtgcgccatgctgctggccgccctcagctggcag
tacctcagcaccatctccaaggccgccgaagagtacgtccaggcaggcgagaactga
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