KEGG   Aythya fuligula (tufted duck): 116488025
Entry
116488025         CDS       T07966                                 
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
aful  Aythya fuligula (tufted duck)
Pathway
aful04382  Cornified envelope formation
aful04510  Focal adhesion
aful04512  ECM-receptor interaction
aful04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:aful00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116488025 (COL4A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116488025 (COL4A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116488025 (COL4A2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    116488025 (COL4A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aful04147]
    116488025 (COL4A2)
   00536 Glycosaminoglycan binding proteins [BR:aful00536]
    116488025 (COL4A2)
Exosome [BR:aful04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   116488025 (COL4A2)
Glycosaminoglycan binding proteins [BR:aful00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   116488025 (COL4A2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 116488025
NCBI-ProteinID: XP_032041202
UniProt: A0A6J3CW90
LinkDB
Position
1:145691692..145826671
AA seq 1723 aa
MDIAQLPSASALVRPDLGIALVLLEVVLSAARVDAGRPPKRHARGAKTYAGPCGGRDCSG
GCQCFPEKGGRGQPGLLGSQGFPGPPGLMGIPGVQGPKGHKGERGHPGISGPKGEMGLRG
VTGFPGADGVPGHPGQPGSRGKPGHDGCNGTVGDPGDSGTPGFSGFPGTIGVQGPKGQKG
EPYILPPDIARQYRGEPGDPGFSGFPGSPGILGVQGPIGPRGQRGRPGPPGPPGPQGPQG
NRGLGFYGEKGEQGPPGPPGPPGLPTKELTGVPSDKHKGERGERGQKGEPGQPGIQYTGE
RGEKGVTGFAGQRGLPGIDGYPGLIGERGFSGPDGLPGGYGPRGAKGEQGEMGPPGPPVY
VPYPIPRKGTRGEPGFPGASGLQGEPGEQGDRGLPGLPGFSDGDGDKPGLPGEMGPKGEK
GELGSPAYQSGPPGSPGRHGEPGQRGPPGPAGTPGSLFGLKGREGTPGRPGTQGYPGPRG
QKGPKGEEGDCSKCLLGEELRRGSTGPPGPPGFPGTPGQPGRKGEPGDQGPHGIPGYPGA
KGSSGQEGFPGPKGQKGDSFYITTKGTKGIRGDPGLPGVRGGDGFPGRDGLDGLPGQPGL
PGDTIRGFPGDPGYPGELGPKGFPGETGLPGEGFVGPKGYRGPPGDHGTDGSPGPPGLPG
PPGEPGQLDCGQVIEDFSRGDGTEPIWSGGGCVRPPKGSQGKPGLPGATGAKGARGFPGD
PGPVGYPGLNGTRGDPGREGLPGPPGFTGPRGDRGLNGLPGLQGHPGLTGKPGAPGLTGQ
KGVPGEVLRATAGSRGDAGLPGFPGLKGAPGDQGVPGVRGADGSPGLPGAKGDPGLQGLP
GLMGLPGSPGTHGFPGPPGNPGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGLKGLSGDK
GEMGHPGLQGIPGVMGPPGISGMDGFPGDKGLKGSPGIDGFKGMPGLKGRPGIKGIKGEF
GSFGARGDKGAQGARGFKGDRGEQGPPGEPPKLKPSMMMEVKGEKGDVGETGTKGFFGLK
GSKGMPGLPGKTGTPGSPGHPSYVAGVKGDIGAKGTTGVKGYPGPAGSPGIRGFPGSTGG
RGDKGAPGISGHFGTPGSHGEIGEPGDTINLPGMPGLKGEVGVPGLTGLRGGPGQKGEGG
DPGVPGIEGIKGIQGVPGSLGQEGLPGLVGPPGQQGSPGTPGFQGEKGTPGWPGLPGQAG
LPGLRGISGLHGLPGTKGLPGSPGPDGYGSAGFPGTVGDKGEAGEPSRVEGSRGPPGQKG
DRGVPGIQGTFGIPGQDGFPGPPGISNISGYPGDKGSPGLDGVPGYPGLQGQPGVPAPPG
SKGESGQAGVSGQTGPKGERGDPGLAGRPGIPGYPGPKGRKGEPGVIGFMGTVGFPGDLG
PIGPKGDRGLTGFQGPPGSPGLPPVPPRLIAEQGTPGPRGNAGPPGSPGDMGPQGPPGDP
GFRGSPGDPGLQGRGGIPAPPGSRGEQGAMGFQGPVGFEGQPGRPGSPGLPGMPGRSVSI
GYLLVKHSQSDQEPMCPIGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLY
CNPGDICYYANRNDKSYWLSTTAPLPMMPVAEEEIRPYISRCSVCEAPAVAIAVHSQEAS
IPRCPEGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYF
ANKYSFWLTTIDQSFQSKPSADTLKAGLIQSHISRCQVCMKNL
NT seq 5172 nt   +upstreamnt  +downstreamnt
atggacatcgcgcagcttcccagcgcgagtgctttggttcgtccggatctggggatcgcg
ctggtcctgctggaggtggtgctgtcagccgccagagtagatgctggaaggccaccaaaa
cgccatgcgaggggtgcaaagacttacgcaggaccatgtggaggaagagactgcagtgga
ggatgccagtgttttcctgaaaaaggaggccgtggccagccaggactccttggatcacag
gggttccctggaccaccaggattgatggggatcccaggtgtgcaaggtcccaaaggtcac
aaaggtgaaagaggacatccaggaataagtggacccaaaggagaaatggggctaagagga
gtcactggattcccaggggcagatggcgttcctggtcatccagggcagccaggatcaagg
gggaaaccgggtcatgatggctgtaacgggacagtaggtgaccctggagactcaggaact
cctggattctctggtttccctggtaccattggagtccaaggaccaaagggccagaagggg
gagccatatatactaccaccggacattgccagacaataccggggagaacctggggatcca
ggattcagtggttttcctggatctccaggtatactgggtgttcaaggacctattggtcca
agaggacaacgaggaagaccaggaccaccagggcccccaggaccacaaggaccacaaggc
aacaggggccttggcttctatggagaaaaaggcgaacagggaccaccaggtccaccaggt
ccacccgggcttcctacaaaagaactgacaggtgtcccctctgacaaacacaagggtgaa
agaggagaacgagggcaaaaaggggaacctggacaaccaggtatacaatacactggtgaa
agaggtgaaaaaggggtaacgggcttcgcaggacaaaggggactacctggtatcgatggc
tatccaggactcattggagaaagaggtttttcaggacctgatggcctaccaggtggatac
ggtcctagaggtgccaagggagagcagggcgagatgggtcctcctggaccacctgtctat
gttccgtaccccattccaagaaaaggtacaagaggtgaaccaggctttccaggtgcttct
ggactacagggagaaccaggagagcaaggagatcgtgggctgcctggtcttcctggattc
tctgatggagatggggataagccaggcttacctggagaaatgggaccaaaaggtgaaaaa
ggtgaattaggatctcctgcttatcagtcaggcccacctgggtcaccaggtaggcacggt
gaaccagggcagcgtggtcctcctggtcctgctggaactcccggttctctctttggatta
aaaggacgggaagggacaccaggtagacctggcacacaaggttaccctgggccaagagga
caaaaaggacccaaaggtgaagaaggggattgcagtaaatgccttctgggtgaagaactc
agaaggggctccactggcccccctggcccacctggttttccaggaacccctggccagcca
gggagaaaaggagaacctggtgatcaaggtccacatggtattcctggctaccctggagca
aaaggatcgtcaggtcaagaaggatttccaggaccaaaaggacaaaagggagactctttt
tacataactactaaaggcaccaaaggaatccgaggagaccctgggcttcctggtgtcaga
gggggagatggttttccaggcagagatggattagatggtttaccgggacagcctggcctt
ccgggtgatactatcaggggcttcccaggcgatcctggttatccaggcgaattaggccca
aagggctttccaggagaaacgggtcttccaggtgaaggatttgttggtccaaaagggtac
cgtggtcctccaggtgaccatggaacagacggaagccctggacctccaggtctgcccggt
ccaccaggagagcctggccaactagactgtgggcaggtcattgaagacttttctagagga
gacggaactgaaccaatatggtcaggtgggggctgtgtaaggccaccaaaggggtcccaa
ggcaagccaggactgccaggagccacaggagctaaaggtgcaagaggattcccaggtgac
ccaggcccagtgggatacccagggctcaatggtacacgaggtgatccaggtcgggaagga
ttgccaggtcctccaggttttactgggcctcggggagacaggggcctaaatggactacct
ggactacaaggacacccaggccttacaggaaagcctggtgctccaggactgacaggacag
aagggcgttcctggtgaagttttgagagcaacagcaggttctcgaggggatgctgggctg
cctggcttccctggcttgaaaggcgcacctggagatcaaggagtaccaggagttagagga
gcggatggtagcccaggtttgccaggagccaaaggcgatccagggctgcagggtctccct
ggtctgatgggtttgccaggatcaccaggaacacacggattcccaggcccaccagggaac
cccgggccagacggaggacctgggtctcaaggaccccttggtccaccaggtgcaagggga
gaagatggtgagcaaggttttcctggtcccgtgggcctgaaaggtctgtctggtgacaaa
ggtgaaatggggcacccaggattgcaaggtatacctggcgtgatgggtccccctggcatc
agtggaatggatggctttccaggagataaaggtctaaaaggttcacctggcattgatggt
ttcaaaggcatgccaggcctgaaaggaagaccaggaatcaaaggaatcaaaggagaattt
ggttcattcggggctcggggtgataaaggcgcacagggcgcacgaggctttaaaggtgac
cgtggggaacagggtcccccaggagagcccccaaagcttaagcctagcatgatgatggaa
gttaaaggtgaaaaaggagatgttggagaaaccggcaccaagggattctttggcttgaaa
ggtagcaagggaatgccaggcctccccggtaagacaggaactcccgggtctccggggcac
cccagttacgtggctggtgtgaagggggacattggtgcaaaaggaacgacaggtgtgaaa
gggtatcctggtcctgctggctctcctggcatcagaggcttccctggcagcacaggaggc
aggggagataagggtgccccgggaatttcaggccattttggtactcctggctcccatggt
gaaataggtgagccgggagatactataaacttaccaggaatgcccggtcttaaaggggaa
gtcggtgtgccaggcctaacaggcttaagaggaggcccaggacaaaaaggtgaagggggt
gaccctggtgtccctggcattgagggcatcaagggcatacagggtgtccctggctccttg
ggacaagaaggtttgccaggactggttggccccccagggcagcaaggaagcccggggaca
cctggatttcaaggtgaaaagggaactcccggctggccaggcttacctggacaagcaggc
ttgcctggcttgagaggaatcagtggactgcacggcttaccgggcactaaggggcttcca
ggatcaccaggtccggatggctacggctctgcaggctttccaggcaccgtgggtgacaaa
ggagaagcaggagagccgagcagagtggaaggcagccgaggccctccgggtcagaaggga
gacagaggtgttccagggatccaaggaacctttggcattcctgggcaggatggatttcca
gggcctcctgggatttcaaatatatcaggatatcctggtgataaaggttccccaggtctg
gacggagtgccaggctatccaggactacaggggcagcctggagtaccagctccacctgga
agcaaaggagaaagcgggcaagcaggtgtgagcggacaaactggcccaaaaggagaaaga
ggtgaccctggattagcagggagacctggaattcccgggtaccctggaccaaaaggtcgc
aagggtgagccaggtgtcattggctttatgggcacagtaggatttccaggtgatctggga
cccatcggacccaagggggacagaggactaactggctttcagggccctccaggctctcct
gggctgccgcctgttcctccaaggctgattgctgagcaaggaacaccaggtccccgtgga
aacgcaggacctccgggaagcccaggagatatgggccctcagggtccaccaggcgatcca
ggtttcagaggctcacctggagacccagggctccagggcagaggtggcattccagctcct
cctggatccagaggtgaacaaggagcaatggggtttcaaggtccagtgggatttgaaggc
cagccaggccgccctggtagccctgggctgccaggcatgccgggtcgcagcgtcagcatc
ggctacctgctggtgaagcacagccagtccgaccaagagcccatgtgtccgatcggcatg
aacaaactctggagtggatacagcctcctgtacttcgaaggtcaagagaaagcacacaac
caggacctagggctggccggctcatgcttggctcgtttcagtacgatgccattcctctac
tgtaaccccggggatatttgttactatgcaaatcgaaatgataaatcctactggctctcg
actacagcacctctcccaatgatgcctgtggcagaagaagaaattagaccatatatcagc
cgctgctcagtctgtgaggccccagctgtggcgattgctgtccatagccaagaagcttct
attcctcgctgccctgaaggctggcgcagtttgtggattggatattccttcctcatgcac
actgcagctggtgatgaaggtggaggacagtcgctggtttctcctgggagctgcctggaa
gatttcagagctactcctttcatcgaatgcaacggtgcacgtggaacctgtcattacttt
gcaaataaatacagcttctggctcactacgattgaccagtccttccaaagcaagccctcc
gcagatacactcaaggcaggactcatccaaagccatatcagcagatgccaagtctgtatg
aaaaatttatag

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