Aythya fuligula (tufted duck): 116488025
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Entry
116488025 CDS
T07966
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04382
Cornified envelope formation
aful04510
Focal adhesion
aful04512
ECM-receptor interaction
aful04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116488025 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116488025 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116488025 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116488025 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aful04147
]
116488025 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
aful00536
]
116488025 (COL4A2)
Exosome [BR:
aful04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
116488025 (COL4A2)
Glycosaminoglycan binding proteins [BR:
aful00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116488025 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
116488025
NCBI-ProteinID:
XP_032041202
UniProt:
A0A6J3CW90
LinkDB
All DBs
Position
1:145691692..145826671
Genome browser
AA seq
1723 aa
AA seq
DB search
MDIAQLPSASALVRPDLGIALVLLEVVLSAARVDAGRPPKRHARGAKTYAGPCGGRDCSG
GCQCFPEKGGRGQPGLLGSQGFPGPPGLMGIPGVQGPKGHKGERGHPGISGPKGEMGLRG
VTGFPGADGVPGHPGQPGSRGKPGHDGCNGTVGDPGDSGTPGFSGFPGTIGVQGPKGQKG
EPYILPPDIARQYRGEPGDPGFSGFPGSPGILGVQGPIGPRGQRGRPGPPGPPGPQGPQG
NRGLGFYGEKGEQGPPGPPGPPGLPTKELTGVPSDKHKGERGERGQKGEPGQPGIQYTGE
RGEKGVTGFAGQRGLPGIDGYPGLIGERGFSGPDGLPGGYGPRGAKGEQGEMGPPGPPVY
VPYPIPRKGTRGEPGFPGASGLQGEPGEQGDRGLPGLPGFSDGDGDKPGLPGEMGPKGEK
GELGSPAYQSGPPGSPGRHGEPGQRGPPGPAGTPGSLFGLKGREGTPGRPGTQGYPGPRG
QKGPKGEEGDCSKCLLGEELRRGSTGPPGPPGFPGTPGQPGRKGEPGDQGPHGIPGYPGA
KGSSGQEGFPGPKGQKGDSFYITTKGTKGIRGDPGLPGVRGGDGFPGRDGLDGLPGQPGL
PGDTIRGFPGDPGYPGELGPKGFPGETGLPGEGFVGPKGYRGPPGDHGTDGSPGPPGLPG
PPGEPGQLDCGQVIEDFSRGDGTEPIWSGGGCVRPPKGSQGKPGLPGATGAKGARGFPGD
PGPVGYPGLNGTRGDPGREGLPGPPGFTGPRGDRGLNGLPGLQGHPGLTGKPGAPGLTGQ
KGVPGEVLRATAGSRGDAGLPGFPGLKGAPGDQGVPGVRGADGSPGLPGAKGDPGLQGLP
GLMGLPGSPGTHGFPGPPGNPGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGLKGLSGDK
GEMGHPGLQGIPGVMGPPGISGMDGFPGDKGLKGSPGIDGFKGMPGLKGRPGIKGIKGEF
GSFGARGDKGAQGARGFKGDRGEQGPPGEPPKLKPSMMMEVKGEKGDVGETGTKGFFGLK
GSKGMPGLPGKTGTPGSPGHPSYVAGVKGDIGAKGTTGVKGYPGPAGSPGIRGFPGSTGG
RGDKGAPGISGHFGTPGSHGEIGEPGDTINLPGMPGLKGEVGVPGLTGLRGGPGQKGEGG
DPGVPGIEGIKGIQGVPGSLGQEGLPGLVGPPGQQGSPGTPGFQGEKGTPGWPGLPGQAG
LPGLRGISGLHGLPGTKGLPGSPGPDGYGSAGFPGTVGDKGEAGEPSRVEGSRGPPGQKG
DRGVPGIQGTFGIPGQDGFPGPPGISNISGYPGDKGSPGLDGVPGYPGLQGQPGVPAPPG
SKGESGQAGVSGQTGPKGERGDPGLAGRPGIPGYPGPKGRKGEPGVIGFMGTVGFPGDLG
PIGPKGDRGLTGFQGPPGSPGLPPVPPRLIAEQGTPGPRGNAGPPGSPGDMGPQGPPGDP
GFRGSPGDPGLQGRGGIPAPPGSRGEQGAMGFQGPVGFEGQPGRPGSPGLPGMPGRSVSI
GYLLVKHSQSDQEPMCPIGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLY
CNPGDICYYANRNDKSYWLSTTAPLPMMPVAEEEIRPYISRCSVCEAPAVAIAVHSQEAS
IPRCPEGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYF
ANKYSFWLTTIDQSFQSKPSADTLKAGLIQSHISRCQVCMKNL
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgcgcagcttcccagcgcgagtgctttggttcgtccggatctggggatcgcg
ctggtcctgctggaggtggtgctgtcagccgccagagtagatgctggaaggccaccaaaa
cgccatgcgaggggtgcaaagacttacgcaggaccatgtggaggaagagactgcagtgga
ggatgccagtgttttcctgaaaaaggaggccgtggccagccaggactccttggatcacag
gggttccctggaccaccaggattgatggggatcccaggtgtgcaaggtcccaaaggtcac
aaaggtgaaagaggacatccaggaataagtggacccaaaggagaaatggggctaagagga
gtcactggattcccaggggcagatggcgttcctggtcatccagggcagccaggatcaagg
gggaaaccgggtcatgatggctgtaacgggacagtaggtgaccctggagactcaggaact
cctggattctctggtttccctggtaccattggagtccaaggaccaaagggccagaagggg
gagccatatatactaccaccggacattgccagacaataccggggagaacctggggatcca
ggattcagtggttttcctggatctccaggtatactgggtgttcaaggacctattggtcca
agaggacaacgaggaagaccaggaccaccagggcccccaggaccacaaggaccacaaggc
aacaggggccttggcttctatggagaaaaaggcgaacagggaccaccaggtccaccaggt
ccacccgggcttcctacaaaagaactgacaggtgtcccctctgacaaacacaagggtgaa
agaggagaacgagggcaaaaaggggaacctggacaaccaggtatacaatacactggtgaa
agaggtgaaaaaggggtaacgggcttcgcaggacaaaggggactacctggtatcgatggc
tatccaggactcattggagaaagaggtttttcaggacctgatggcctaccaggtggatac
ggtcctagaggtgccaagggagagcagggcgagatgggtcctcctggaccacctgtctat
gttccgtaccccattccaagaaaaggtacaagaggtgaaccaggctttccaggtgcttct
ggactacagggagaaccaggagagcaaggagatcgtgggctgcctggtcttcctggattc
tctgatggagatggggataagccaggcttacctggagaaatgggaccaaaaggtgaaaaa
ggtgaattaggatctcctgcttatcagtcaggcccacctgggtcaccaggtaggcacggt
gaaccagggcagcgtggtcctcctggtcctgctggaactcccggttctctctttggatta
aaaggacgggaagggacaccaggtagacctggcacacaaggttaccctgggccaagagga
caaaaaggacccaaaggtgaagaaggggattgcagtaaatgccttctgggtgaagaactc
agaaggggctccactggcccccctggcccacctggttttccaggaacccctggccagcca
gggagaaaaggagaacctggtgatcaaggtccacatggtattcctggctaccctggagca
aaaggatcgtcaggtcaagaaggatttccaggaccaaaaggacaaaagggagactctttt
tacataactactaaaggcaccaaaggaatccgaggagaccctgggcttcctggtgtcaga
gggggagatggttttccaggcagagatggattagatggtttaccgggacagcctggcctt
ccgggtgatactatcaggggcttcccaggcgatcctggttatccaggcgaattaggccca
aagggctttccaggagaaacgggtcttccaggtgaaggatttgttggtccaaaagggtac
cgtggtcctccaggtgaccatggaacagacggaagccctggacctccaggtctgcccggt
ccaccaggagagcctggccaactagactgtgggcaggtcattgaagacttttctagagga
gacggaactgaaccaatatggtcaggtgggggctgtgtaaggccaccaaaggggtcccaa
ggcaagccaggactgccaggagccacaggagctaaaggtgcaagaggattcccaggtgac
ccaggcccagtgggatacccagggctcaatggtacacgaggtgatccaggtcgggaagga
ttgccaggtcctccaggttttactgggcctcggggagacaggggcctaaatggactacct
ggactacaaggacacccaggccttacaggaaagcctggtgctccaggactgacaggacag
aagggcgttcctggtgaagttttgagagcaacagcaggttctcgaggggatgctgggctg
cctggcttccctggcttgaaaggcgcacctggagatcaaggagtaccaggagttagagga
gcggatggtagcccaggtttgccaggagccaaaggcgatccagggctgcagggtctccct
ggtctgatgggtttgccaggatcaccaggaacacacggattcccaggcccaccagggaac
cccgggccagacggaggacctgggtctcaaggaccccttggtccaccaggtgcaagggga
gaagatggtgagcaaggttttcctggtcccgtgggcctgaaaggtctgtctggtgacaaa
ggtgaaatggggcacccaggattgcaaggtatacctggcgtgatgggtccccctggcatc
agtggaatggatggctttccaggagataaaggtctaaaaggttcacctggcattgatggt
ttcaaaggcatgccaggcctgaaaggaagaccaggaatcaaaggaatcaaaggagaattt
ggttcattcggggctcggggtgataaaggcgcacagggcgcacgaggctttaaaggtgac
cgtggggaacagggtcccccaggagagcccccaaagcttaagcctagcatgatgatggaa
gttaaaggtgaaaaaggagatgttggagaaaccggcaccaagggattctttggcttgaaa
ggtagcaagggaatgccaggcctccccggtaagacaggaactcccgggtctccggggcac
cccagttacgtggctggtgtgaagggggacattggtgcaaaaggaacgacaggtgtgaaa
gggtatcctggtcctgctggctctcctggcatcagaggcttccctggcagcacaggaggc
aggggagataagggtgccccgggaatttcaggccattttggtactcctggctcccatggt
gaaataggtgagccgggagatactataaacttaccaggaatgcccggtcttaaaggggaa
gtcggtgtgccaggcctaacaggcttaagaggaggcccaggacaaaaaggtgaagggggt
gaccctggtgtccctggcattgagggcatcaagggcatacagggtgtccctggctccttg
ggacaagaaggtttgccaggactggttggccccccagggcagcaaggaagcccggggaca
cctggatttcaaggtgaaaagggaactcccggctggccaggcttacctggacaagcaggc
ttgcctggcttgagaggaatcagtggactgcacggcttaccgggcactaaggggcttcca
ggatcaccaggtccggatggctacggctctgcaggctttccaggcaccgtgggtgacaaa
ggagaagcaggagagccgagcagagtggaaggcagccgaggccctccgggtcagaaggga
gacagaggtgttccagggatccaaggaacctttggcattcctgggcaggatggatttcca
gggcctcctgggatttcaaatatatcaggatatcctggtgataaaggttccccaggtctg
gacggagtgccaggctatccaggactacaggggcagcctggagtaccagctccacctgga
agcaaaggagaaagcgggcaagcaggtgtgagcggacaaactggcccaaaaggagaaaga
ggtgaccctggattagcagggagacctggaattcccgggtaccctggaccaaaaggtcgc
aagggtgagccaggtgtcattggctttatgggcacagtaggatttccaggtgatctggga
cccatcggacccaagggggacagaggactaactggctttcagggccctccaggctctcct
gggctgccgcctgttcctccaaggctgattgctgagcaaggaacaccaggtccccgtgga
aacgcaggacctccgggaagcccaggagatatgggccctcagggtccaccaggcgatcca
ggtttcagaggctcacctggagacccagggctccagggcagaggtggcattccagctcct
cctggatccagaggtgaacaaggagcaatggggtttcaaggtccagtgggatttgaaggc
cagccaggccgccctggtagccctgggctgccaggcatgccgggtcgcagcgtcagcatc
ggctacctgctggtgaagcacagccagtccgaccaagagcccatgtgtccgatcggcatg
aacaaactctggagtggatacagcctcctgtacttcgaaggtcaagagaaagcacacaac
caggacctagggctggccggctcatgcttggctcgtttcagtacgatgccattcctctac
tgtaaccccggggatatttgttactatgcaaatcgaaatgataaatcctactggctctcg
actacagcacctctcccaatgatgcctgtggcagaagaagaaattagaccatatatcagc
cgctgctcagtctgtgaggccccagctgtggcgattgctgtccatagccaagaagcttct
attcctcgctgccctgaaggctggcgcagtttgtggattggatattccttcctcatgcac
actgcagctggtgatgaaggtggaggacagtcgctggtttctcctgggagctgcctggaa
gatttcagagctactcctttcatcgaatgcaacggtgcacgtggaacctgtcattacttt
gcaaataaatacagcttctggctcactacgattgaccagtccttccaaagcaagccctcc
gcagatacactcaaggcaggactcatccaaagccatatcagcagatgccaagtctgtatg
aaaaatttatag
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